Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
USP13Q92995 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP13Q92995 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.64■□□□□ 0.89
USP13Q92995 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
USP13Q92995 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
USP13Q92995 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP13Q92995 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP13Q92995 AL355355.2-201ENST00000442321 338 ntBASIC20.64■□□□□ 0.89
USP13Q92995 FAM210CP-201ENST00000445714 574 ntBASIC20.64■□□□□ 0.89
USP13Q92995 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
USP13Q92995 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP13Q92995 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
USP13Q92995 AC073195.1-201ENST00000607241 877 ntBASIC20.64■□□□□ 0.89
USP13Q92995 AC133561.5-201ENST00000635547 218 ntBASIC20.64■□□□□ 0.89
USP13Q92995 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.64■□□□□ 0.89
USP13Q92995 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP13Q92995 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP13Q92995 DPP3P2-201ENST00000416030 1696 ntBASIC20.64■□□□□ 0.89
USP13Q92995 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP13Q92995 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP13Q92995 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.63■□□□□ 0.89
USP13Q92995 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP13Q92995 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP13Q92995 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP13Q92995 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
USP13Q92995 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP13Q92995 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP13Q92995 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
USP13Q92995 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.63■□□□□ 0.89
USP13Q92995 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.63■□□□□ 0.89
USP13Q92995 AC007225.1-201ENST00000566331 1836 ntBASIC20.63■□□□□ 0.89
USP13Q92995 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.63■□□□□ 0.89
USP13Q92995 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP13Q92995 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.63■□□□□ 0.89
USP13Q92995 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.63■□□□□ 0.89
USP13Q92995 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.63■□□□□ 0.89
USP13Q92995 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP13Q92995 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.63■□□□□ 0.89
USP13Q92995 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP13Q92995 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
USP13Q92995 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USP13Q92995 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
USP13Q92995 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.62■□□□□ 0.89
USP13Q92995 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.62■□□□□ 0.89
USP13Q92995 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.62■□□□□ 0.89
USP13Q92995 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USP13Q92995 LINC01521-201ENST00000504184 1943 ntBASIC20.62■□□□□ 0.89
USP13Q92995 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.62■□□□□ 0.89
USP13Q92995 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.62■□□□□ 0.89
USP13Q92995 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP13Q92995 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.61■□□□□ 0.89
USP13Q92995 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
USP13Q92995 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.61■□□□□ 0.89
USP13Q92995 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 AP002982.1-201ENST00000492365 877 ntBASIC20.61■□□□□ 0.89
USP13Q92995 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.61■□□□□ 0.89
USP13Q92995 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.61■□□□□ 0.89
USP13Q92995 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.61■□□□□ 0.89
USP13Q92995 AL353708.3-201ENST00000610272 989 ntBASIC20.61■□□□□ 0.89
USP13Q92995 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
USP13Q92995 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.61■□□□□ 0.89
USP13Q92995 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.61■□□□□ 0.89
USP13Q92995 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.61■□□□□ 0.89
USP13Q92995 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
USP13Q92995 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP13Q92995 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP13Q92995 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.6■□□□□ 0.89
USP13Q92995 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP13Q92995 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP13Q92995 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP13Q92995 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.6■□□□□ 0.89
USP13Q92995 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
USP13Q92995 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP13Q92995 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP13Q92995 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP13Q92995 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
USP13Q92995 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.6■□□□□ 0.89
USP13Q92995 AC012306.2-201ENST00000609350 630 ntBASIC20.6■□□□□ 0.89
USP13Q92995 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms