Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 TREX1-205ENST00000625293 1783 ntBASIC19.95■□□□□ 0.78
PTCD2Q8WV60 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.95■□□□□ 0.78
PTCD2Q8WV60 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.94■□□□□ 0.78
PTCD2Q8WV60 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 AC006557.6-201ENST00000623071 864 ntBASIC19.94■□□□□ 0.78
PTCD2Q8WV60 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.94■□□□□ 0.78
PTCD2Q8WV60 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 RPS2P52-201ENST00000469610 820 ntBASIC19.93■□□□□ 0.78
PTCD2Q8WV60 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCD2Q8WV60 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 AL158211.5-201ENST00000623583 2518 ntBASIC19.92■□□□□ 0.78
PTCD2Q8WV60 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCD2Q8WV60 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 AC066615.1-201ENST00000640911 628 ntBASIC19.91■□□□□ 0.78
PTCD2Q8WV60 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms