Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLL1Q8TB92 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLL1Q8TB92 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLL1Q8TB92 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.36■□□□□ 0.69
HMGCLL1Q8TB92 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLL1Q8TB92 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HMGCLL1Q8TB92 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 UNC93B4-201ENST00000505679 747 ntBASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLL1Q8TB92 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HMGCLL1Q8TB92 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCLL1Q8TB92 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCLL1Q8TB92 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCLL1Q8TB92 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
HMGCLL1Q8TB92 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCLL1Q8TB92 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
HMGCLL1Q8TB92 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCLL1Q8TB92 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLL1Q8TB92 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 SOX15-203ENST00000570788 1093 ntBASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 AC008403.3-201ENST00000598924 454 ntBASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms