Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 AL355075.4-201ENST00000554988 638 ntBASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 AL023875.1-201ENST00000640777 796 ntBASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NKX2-3Q8TAU0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 AC239809.2-201ENST00000415381 517 ntBASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.41■■□□□ 1.34
NKX2-3Q8TAU0 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 AC110285.5-201ENST00000611501 352 ntBASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NKX2-3Q8TAU0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
NKX2-3Q8TAU0 AC018553.1-201ENST00000616682 1458 ntBASIC23.39■■□□□ 1.34
NKX2-3Q8TAU0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 PRKY-204ENST00000533551 1019 ntBASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NKX2-3Q8TAU0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 RARRES2P10-201ENST00000564312 460 ntBASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.38■■□□□ 1.33
NKX2-3Q8TAU0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NKX2-3Q8TAU0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NKX2-3Q8TAU0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NKX2-3Q8TAU0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.37■■□□□ 1.33
NKX2-3Q8TAU0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NKX2-3Q8TAU0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NKX2-3Q8TAU0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NKX2-3Q8TAU0 TFP1-202ENST00000475455 1573 ntBASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms