Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 PRKY-204ENST00000533551 1019 ntBASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDND2Q8NHS1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 AC073314.1-201ENST00000568729 2216 ntBASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDND2Q8NHS1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 AC012618.2-201ENST00000428058 849 ntBASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDND2Q8NHS1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 RPS2P55-201ENST00000397318 883 ntBASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 AC107956.1-201ENST00000494359 873 ntBASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDND2Q8NHS1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms