Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL22A1Q8NFW1 AC242852.2-201ENST00000615738 1807 ntBASIC26.54■■□□□ 1.84
COL22A1Q8NFW1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC26.54■■□□□ 1.84
COL22A1Q8NFW1 PRELID1P1-202ENST00000567272 903 ntBASIC26.54■■□□□ 1.84
COL22A1Q8NFW1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
COL22A1Q8NFW1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL22A1Q8NFW1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL22A1Q8NFW1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL22A1Q8NFW1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL22A1Q8NFW1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.53■■□□□ 1.84
COL22A1Q8NFW1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL22A1Q8NFW1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL22A1Q8NFW1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC26.53■■□□□ 1.84
COL22A1Q8NFW1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC26.53■■□□□ 1.84
COL22A1Q8NFW1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL22A1Q8NFW1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC26.53■■□□□ 1.84
COL22A1Q8NFW1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.53■■□□□ 1.84
COL22A1Q8NFW1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC26.53■■□□□ 1.84
COL22A1Q8NFW1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL22A1Q8NFW1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC26.52■■□□□ 1.84
COL22A1Q8NFW1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL22A1Q8NFW1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.52■■□□□ 1.84
COL22A1Q8NFW1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL22A1Q8NFW1 AP000523.1-201ENST00000398242 1049 ntBASIC26.52■■□□□ 1.84
COL22A1Q8NFW1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL22A1Q8NFW1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
COL22A1Q8NFW1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL22A1Q8NFW1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL22A1Q8NFW1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL22A1Q8NFW1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
COL22A1Q8NFW1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 AC004870.1-201ENST00000315132 882 ntBASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL22A1Q8NFW1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC26.5■■□□□ 1.83
COL22A1Q8NFW1 LINC01311-201ENST00000565162 1445 ntBASIC26.49■■□□□ 1.83
COL22A1Q8NFW1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL22A1Q8NFW1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC26.49■■□□□ 1.83
COL22A1Q8NFW1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL22A1Q8NFW1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL22A1Q8NFW1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
COL22A1Q8NFW1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL22A1Q8NFW1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC26.49■■□□□ 1.83
COL22A1Q8NFW1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
COL22A1Q8NFW1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC26.49■■□□□ 1.83
COL22A1Q8NFW1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
COL22A1Q8NFW1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
COL22A1Q8NFW1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL22A1Q8NFW1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
COL22A1Q8NFW1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC26.48■■□□□ 1.83
COL22A1Q8NFW1 AC006538.3-201ENST00000612495 578 ntBASIC26.48■■□□□ 1.83
COL22A1Q8NFW1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
COL22A1Q8NFW1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC26.48■■□□□ 1.83
COL22A1Q8NFW1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL22A1Q8NFW1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC26.48■■□□□ 1.83
COL22A1Q8NFW1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
COL22A1Q8NFW1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 MIR3652-201ENST00000579335 131 ntBASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 IFNL4P1-201ENST00000607083 540 ntBASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 GPALPP1-207ENST00000611650 899 ntBASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 AC092119.3-201ENST00000612618 583 ntBASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 AL645929.1-201ENST00000420084 975 ntBASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 FAAHP1-202ENST00000446499 1238 ntBASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL22A1Q8NFW1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
COL22A1Q8NFW1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC26.46■■□□□ 1.83
COL22A1Q8NFW1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms