Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 Z85996.1-201ENST00000494644 937 ntBASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 AC104692.2-201ENST00000603054 253 ntBASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 AC092119.3-201ENST00000612618 583 ntBASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 AC011298.2-201ENST00000617989 482 ntBASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC168Q8NDH2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 EMBP1-201ENST00000458200 901 ntBASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC168Q8NDH2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC168Q8NDH2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC168Q8NDH2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC168Q8NDH2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC168Q8NDH2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC168Q8NDH2 AC117500.6-201ENST00000624871 588 ntBASIC16.52■□□□□ 0.23
CCDC168Q8NDH2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC168Q8NDH2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 AL732292.2-201ENST00000609649 430 ntBASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC168Q8NDH2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 AP002469.2-201ENST00000531724 424 ntBASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 AC004980.1-204ENST00000429707 299 ntBASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 AC131212.4-201ENST00000623606 975 ntBASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC168Q8NDH2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC168Q8NDH2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC168Q8NDH2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC168Q8NDH2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC168Q8NDH2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC168Q8NDH2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC168Q8NDH2 AL160237.2-201ENST00000556165 472 ntBASIC16.49■□□□□ 0.23
CCDC168Q8NDH2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCDC168Q8NDH2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC168Q8NDH2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC168Q8NDH2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC168Q8NDH2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms