Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 HOMER2P1-201ENST00000455653 964 ntBASIC15.42■□□□□ 0.06
C3orf56Q8N813 FAM86EP-206ENST00000510506 987 ntBASIC15.42■□□□□ 0.06
C3orf56Q8N813 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.42■□□□□ 0.06
C3orf56Q8N813 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
C3orf56Q8N813 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
C3orf56Q8N813 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.42■□□□□ 0.06
C3orf56Q8N813 CLEC4GP1-201ENST00000596555 870 ntBASIC15.42■□□□□ 0.06
C3orf56Q8N813 AC140113.3-201ENST00000605663 199 ntBASIC15.42■□□□□ 0.06
C3orf56Q8N813 AL138966.2-201ENST00000621997 464 ntBASIC15.42■□□□□ 0.06
C3orf56Q8N813 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
C3orf56Q8N813 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 CASK-201ENST00000378154 2494 ntTSL 5 BASIC15.42■□□□□ 0.06
C3orf56Q8N813 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.42■□□□□ 0.06
C3orf56Q8N813 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
C3orf56Q8N813 KRT8P36-201ENST00000489121 1440 ntBASIC15.42■□□□□ 0.06
C3orf56Q8N813 AC011484.1-201ENST00000377652 1995 ntBASIC15.42■□□□□ 0.06
C3orf56Q8N813 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C3orf56Q8N813 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 AL512604.3-201ENST00000569583 964 ntBASIC15.41■□□□□ 0.06
C3orf56Q8N813 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 AC069148.1-201ENST00000608741 768 ntBASIC15.41■□□□□ 0.06
C3orf56Q8N813 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
C3orf56Q8N813 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
C3orf56Q8N813 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C3orf56Q8N813 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C3orf56Q8N813 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C3orf56Q8N813 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C3orf56Q8N813 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
C3orf56Q8N813 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.4■□□□□ 0.06
C3orf56Q8N813 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.4■□□□□ 0.06
C3orf56Q8N813 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.4■□□□□ 0.06
C3orf56Q8N813 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
C3orf56Q8N813 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.4■□□□□ 0.06
C3orf56Q8N813 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C3orf56Q8N813 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.4■□□□□ 0.06
C3orf56Q8N813 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C3orf56Q8N813 KRT8P20-201ENST00000423953 1409 ntBASIC15.4■□□□□ 0.06
C3orf56Q8N813 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.4■□□□□ 0.06
C3orf56Q8N813 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.4■□□□□ 0.06
C3orf56Q8N813 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C3orf56Q8N813 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
C3orf56Q8N813 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.4■□□□□ 0.06
C3orf56Q8N813 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C3orf56Q8N813 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
C3orf56Q8N813 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C3orf56Q8N813 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
C3orf56Q8N813 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.39■□□□□ 0.05
C3orf56Q8N813 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C3orf56Q8N813 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C3orf56Q8N813 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
C3orf56Q8N813 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C3orf56Q8N813 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.39■□□□□ 0.05
C3orf56Q8N813 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C3orf56Q8N813 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
C3orf56Q8N813 SLC25A1P2-201ENST00000430693 912 ntBASIC15.39■□□□□ 0.05
C3orf56Q8N813 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.39■□□□□ 0.05
C3orf56Q8N813 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.39■□□□□ 0.05
C3orf56Q8N813 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.39■□□□□ 0.05
C3orf56Q8N813 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.39■□□□□ 0.05
C3orf56Q8N813 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
C3orf56Q8N813 AC141257.4-201ENST00000634557 245 ntBASIC15.39■□□□□ 0.05
C3orf56Q8N813 AC136944.6-201ENST00000634818 245 ntBASIC15.39■□□□□ 0.05
C3orf56Q8N813 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C3orf56Q8N813 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
C3orf56Q8N813 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C3orf56Q8N813 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C3orf56Q8N813 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms