Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.47■□□□□ 0.71
APLFQ8IW19 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.47■□□□□ 0.71
APLFQ8IW19 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.47■□□□□ 0.71
APLFQ8IW19 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.47■□□□□ 0.71
APLFQ8IW19 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.47■□□□□ 0.71
APLFQ8IW19 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
APLFQ8IW19 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.47■□□□□ 0.71
APLFQ8IW19 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APLFQ8IW19 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
APLFQ8IW19 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.46■□□□□ 0.71
APLFQ8IW19 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.46■□□□□ 0.71
APLFQ8IW19 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.46■□□□□ 0.71
APLFQ8IW19 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.46■□□□□ 0.71
APLFQ8IW19 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.46■□□□□ 0.71
APLFQ8IW19 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
APLFQ8IW19 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.46■□□□□ 0.71
APLFQ8IW19 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.46■□□□□ 0.71
APLFQ8IW19 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
APLFQ8IW19 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APLFQ8IW19 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.45■□□□□ 0.7
APLFQ8IW19 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
APLFQ8IW19 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
APLFQ8IW19 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.45■□□□□ 0.7
APLFQ8IW19 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.45■□□□□ 0.7
APLFQ8IW19 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.45■□□□□ 0.7
APLFQ8IW19 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.45■□□□□ 0.7
APLFQ8IW19 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.45■□□□□ 0.7
APLFQ8IW19 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.45■□□□□ 0.7
APLFQ8IW19 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.45■□□□□ 0.7
APLFQ8IW19 AC093503.3-201ENST00000624917 2352 ntBASIC19.45■□□□□ 0.7
APLFQ8IW19 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.45■□□□□ 0.7
APLFQ8IW19 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
APLFQ8IW19 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
APLFQ8IW19 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APLFQ8IW19 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APLFQ8IW19 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APLFQ8IW19 AC112907.3-201ENST00000577781 2400 ntBASIC19.44■□□□□ 0.7
APLFQ8IW19 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APLFQ8IW19 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APLFQ8IW19 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APLFQ8IW19 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APLFQ8IW19 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
APLFQ8IW19 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
APLFQ8IW19 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
APLFQ8IW19 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.44■□□□□ 0.7
APLFQ8IW19 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.44■□□□□ 0.7
APLFQ8IW19 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.44■□□□□ 0.7
APLFQ8IW19 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.44■□□□□ 0.7
APLFQ8IW19 AC006058.3-201ENST00000606217 1069 ntBASIC19.44■□□□□ 0.7
APLFQ8IW19 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APLFQ8IW19 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.44■□□□□ 0.7
APLFQ8IW19 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
APLFQ8IW19 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APLFQ8IW19 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APLFQ8IW19 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
APLFQ8IW19 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APLFQ8IW19 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
APLFQ8IW19 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
APLFQ8IW19 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
APLFQ8IW19 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APLFQ8IW19 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms