Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKL3Q8IVW4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 AC005829.2-201ENST00000571422 1056 ntBASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 AC116351.2-201ENST00000606540 1585 ntBASIC20.25■□□□□ 0.83
CDKL3Q8IVW4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 NCF1B-203ENST00000435988 1254 ntBASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 GUSBP6-202ENST00000438529 1198 ntBASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 AC091874.3-201ENST00000512672 1195 ntBASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL3Q8IVW4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 TSPY6P-201ENST00000448518 926 ntBASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL3Q8IVW4 AC093484.2-201ENST00000580996 2166 ntBASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKL3Q8IVW4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms