Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CBWD2Q8IUF1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CBWD2Q8IUF1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.44■■□□□ 1.02
CBWD2Q8IUF1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CBWD2Q8IUF1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CBWD2Q8IUF1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CBWD2Q8IUF1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
CBWD2Q8IUF1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CBWD2Q8IUF1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CBWD2Q8IUF1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 RN7SL471P-201ENST00000580476 299 ntBASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 AL023875.1-201ENST00000640777 796 ntBASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CBWD2Q8IUF1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 PRORSD1P-201ENST00000295112 541 ntBASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 KRT18P29-201ENST00000397031 1267 ntBASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CBWD2Q8IUF1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 AP006587.1-201ENST00000534129 1502 ntBASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CBWD2Q8IUF1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CBWD2Q8IUF1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CBWD2Q8IUF1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CBWD2Q8IUF1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms