Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRTM4Q86VH4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 MIR718-201ENST00000390190 70 ntBASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRTM4Q86VH4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 RPS2P4-201ENST00000476944 856 ntBASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 RARRES2P10-201ENST00000564312 460 ntBASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
LRRTM4Q86VH4 AL135905.2-201ENST00000584934 1404 ntBASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 TCF3P1-201ENST00000423021 1937 ntBASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 AC009237.14-201ENST00000609975 1594 ntBASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LRRTM4Q86VH4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRTM4Q86VH4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRTM4Q86VH4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.33■□□□□ 0.69
LRRTM4Q86VH4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.33■□□□□ 0.69
LRRTM4Q86VH4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.33■□□□□ 0.69
LRRTM4Q86VH4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRTM4Q86VH4 HTR7P1-201ENST00000538670 1336 ntBASIC19.33■□□□□ 0.69
LRRTM4Q86VH4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms