Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.98■■□□□ 1.59
RC3H1Q5TC82 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.98■■□□□ 1.59
RC3H1Q5TC82 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.98■■□□□ 1.59
RC3H1Q5TC82 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RC3H1Q5TC82 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.98■■□□□ 1.59
RC3H1Q5TC82 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.97■■□□□ 1.59
RC3H1Q5TC82 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RC3H1Q5TC82 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 PCED1CP-201ENST00000419887 785 ntBASIC24.96■■□□□ 1.59
RC3H1Q5TC82 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 AL512604.3-201ENST00000569583 964 ntBASIC24.96■■□□□ 1.59
RC3H1Q5TC82 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RC3H1Q5TC82 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RC3H1Q5TC82 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
RC3H1Q5TC82 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.95■■□□□ 1.58
RC3H1Q5TC82 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.95■■□□□ 1.58
RC3H1Q5TC82 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
RC3H1Q5TC82 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.95■■□□□ 1.58
RC3H1Q5TC82 HOMER2P1-201ENST00000455653 964 ntBASIC24.95■■□□□ 1.58
RC3H1Q5TC82 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.95■■□□□ 1.58
RC3H1Q5TC82 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
RC3H1Q5TC82 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 TMEM179-206ENST00000616017 1645 ntBASIC24.94■■□□□ 1.58
RC3H1Q5TC82 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 BET1L-202ENST00000332865 533 ntTSL 5 BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 CA15P1-201ENST00000481698 905 ntBASIC24.94■■□□□ 1.58
RC3H1Q5TC82 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RC3H1Q5TC82 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
RC3H1Q5TC82 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H1Q5TC82 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H1Q5TC82 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H1Q5TC82 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC24.93■■□□□ 1.58
RC3H1Q5TC82 KRT18P48-201ENST00000434763 852 ntBASIC24.93■■□□□ 1.58
RC3H1Q5TC82 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.93■■□□□ 1.58
RC3H1Q5TC82 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H1Q5TC82 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
RC3H1Q5TC82 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H1Q5TC82 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RC3H1Q5TC82 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
RC3H1Q5TC82 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.92■■□□□ 1.58
RC3H1Q5TC82 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RC3H1Q5TC82 AL117328.2-201ENST00000624617 1940 ntBASIC24.92■■□□□ 1.58
RC3H1Q5TC82 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms