Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 INGX-201ENST00000359239 846 ntBASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 AL031985.4-201ENST00000642138 673 ntBASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SHROOM1Q2M3G4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SHROOM1Q2M3G4 AL512408.1-201ENST00000569378 2000 ntBASIC23.08■■□□□ 1.28
SHROOM1Q2M3G4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SHROOM1Q2M3G4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
SHROOM1Q2M3G4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SHROOM1Q2M3G4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 HLA-A-209ENST00000638375 975 ntBASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHROOM1Q2M3G4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 AC020907.5-201ENST00000624372 1936 ntBASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 TUBB8P6-201ENST00000436895 1288 ntBASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 KRT18P35-201ENST00000510488 1269 ntBASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 NAPSB-206ENST00000562112 1266 ntBASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 AC005363.2-201ENST00000618631 242 ntBASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.06■■□□□ 1.28
SHROOM1Q2M3G4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.05■■□□□ 1.28
SHROOM1Q2M3G4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 AC092667.1-201ENST00000434301 2586 ntBASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 TERF1P1-201ENST00000311003 1181 ntBASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 AC073508.3-201ENST00000619697 1419 ntBASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.04■■□□□ 1.28
SHROOM1Q2M3G4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 AC113347.1-201ENST00000413321 391 ntBASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.03■■□□□ 1.28
SHROOM1Q2M3G4 AC010203.1-204ENST00000548782 407 ntBASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms