Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 KRT16P5-201ENST00000455284 522 ntBASIC15.42■□□□□ 0.06
CFHR3Q02985 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CFHR3Q02985 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.42■□□□□ 0.06
CFHR3Q02985 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CFHR3Q02985 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.42■□□□□ 0.06
CFHR3Q02985 AP006294.2-201ENST00000641667 209 ntBASIC15.42■□□□□ 0.06
CFHR3Q02985 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CFHR3Q02985 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CFHR3Q02985 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.42■□□□□ 0.06
CFHR3Q02985 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CFHR3Q02985 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CFHR3Q02985 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CFHR3Q02985 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CFHR3Q02985 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 AL391422.3-201ENST00000603791 2761 ntBASIC15.41■□□□□ 0.06
CFHR3Q02985 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 AC009237.14-201ENST00000609975 1594 ntBASIC15.41■□□□□ 0.06
CFHR3Q02985 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.41■□□□□ 0.06
CFHR3Q02985 YBX1P10-201ENST00000444752 975 ntBASIC15.41■□□□□ 0.06
CFHR3Q02985 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 AC008550.1-201ENST00000511500 884 ntBASIC15.41■□□□□ 0.06
CFHR3Q02985 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.41■□□□□ 0.06
CFHR3Q02985 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.41■□□□□ 0.06
CFHR3Q02985 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CFHR3Q02985 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.41■□□□□ 0.06
CFHR3Q02985 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CFHR3Q02985 AC138932.1-201ENST00000534164 6830 ntBASIC15.41■□□□□ 0.06
CFHR3Q02985 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 TCF3P1-201ENST00000423021 1937 ntBASIC15.41■□□□□ 0.06
CFHR3Q02985 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.41■□□□□ 0.06
CFHR3Q02985 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CFHR3Q02985 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.41■□□□□ 0.06
CFHR3Q02985 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.41■□□□□ 0.06
CFHR3Q02985 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CFHR3Q02985 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CFHR3Q02985 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.4■□□□□ 0.06
CFHR3Q02985 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CFHR3Q02985 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 AC093827.2-201ENST00000512654 315 ntBASIC15.4■□□□□ 0.06
CFHR3Q02985 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 RARRES2P10-201ENST00000564312 460 ntBASIC15.4■□□□□ 0.06
CFHR3Q02985 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.4■□□□□ 0.06
CFHR3Q02985 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.4■□□□□ 0.06
CFHR3Q02985 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.4■□□□□ 0.06
CFHR3Q02985 AC004264.1-201ENST00000608354 794 ntBASIC15.4■□□□□ 0.06
CFHR3Q02985 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.4■□□□□ 0.06
CFHR3Q02985 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.4■□□□□ 0.06
CFHR3Q02985 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.4■□□□□ 0.06
CFHR3Q02985 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.4■□□□□ 0.06
CFHR3Q02985 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFHR3Q02985 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.39■□□□□ 0.05
CFHR3Q02985 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.39■□□□□ 0.05
CFHR3Q02985 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CFHR3Q02985 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 KRT18P16-201ENST00000510337 1294 ntBASIC15.39■□□□□ 0.05
CFHR3Q02985 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.39■□□□□ 0.05
CFHR3Q02985 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.39■□□□□ 0.05
CFHR3Q02985 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.39■□□□□ 0.05
CFHR3Q02985 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CFHR3Q02985 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.39■□□□□ 0.05
CFHR3Q02985 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.39■□□□□ 0.05
CFHR3Q02985 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.39■□□□□ 0.05
CFHR3Q02985 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CFHR3Q02985 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.39■□□□□ 0.05
CFHR3Q02985 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.39■□□□□ 0.05
CFHR3Q02985 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFHR3Q02985 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms