Protein–RNA interactions for Protein: Q01959

SLC6A3, Sodium-dependent dopamine transporter, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3Q01959 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SLC6A3Q01959 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A3Q01959 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A3Q01959 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC6A3Q01959 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC6A3Q01959 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A3Q01959 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A3Q01959 POU5F1P3-201ENST00000428824 1078 ntBASIC20.67■□□□□ 0.9
SLC6A3Q01959 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC6A3Q01959 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC6A3Q01959 AC069544.1-201ENST00000609399 999 ntBASIC20.67■□□□□ 0.9
SLC6A3Q01959 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC6A3Q01959 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A3Q01959 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC6A3Q01959 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A3Q01959 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC6A3Q01959 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A3Q01959 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A3Q01959 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A3Q01959 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SLC6A3Q01959 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A3Q01959 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC6A3Q01959 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A3Q01959 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC6A3Q01959 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SLC6A3Q01959 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SLC6A3Q01959 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A3Q01959 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A3Q01959 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
SLC6A3Q01959 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC6A3Q01959 AC233263.1-201ENST00000578059 224 ntBASIC20.66■□□□□ 0.9
SLC6A3Q01959 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC6A3Q01959 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A3Q01959 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A3Q01959 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A3Q01959 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SLC6A3Q01959 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A3Q01959 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A3Q01959 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC6A3Q01959 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SLC6A3Q01959 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC6A3Q01959 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A3Q01959 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC6A3Q01959 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A3Q01959 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC6A3Q01959 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SLC6A3Q01959 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SLC6A3Q01959 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A3Q01959 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A3Q01959 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A3Q01959 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC6A3Q01959 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A3Q01959 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC6A3Q01959 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC6A3Q01959 AC006058.3-201ENST00000606217 1069 ntBASIC20.65■□□□□ 0.9
SLC6A3Q01959 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A3Q01959 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A3Q01959 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A3Q01959 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SLC6A3Q01959 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A3Q01959 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC6A3Q01959 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A3Q01959 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A3Q01959 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC6A3Q01959 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
SLC6A3Q01959 AP006587.1-201ENST00000534129 1502 ntBASIC20.64■□□□□ 0.9
SLC6A3Q01959 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A3Q01959 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC6A3Q01959 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC6A3Q01959 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A3Q01959 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SLC6A3Q01959 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC6A3Q01959 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A3Q01959 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A3Q01959 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC6A3Q01959 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A3Q01959 MTDHP1-201ENST00000605323 784 ntBASIC20.64■□□□□ 0.89
SLC6A3Q01959 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SLC6A3Q01959 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A3Q01959 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
SLC6A3Q01959 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A3Q01959 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A3Q01959 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A3Q01959 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC6A3Q01959 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC6A3Q01959 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC6A3Q01959 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A3Q01959 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A3Q01959 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A3Q01959 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A3Q01959 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A3Q01959 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A3Q01959 TSPY20P-201ENST00000450910 630 ntBASIC20.63■□□□□ 0.89
SLC6A3Q01959 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC6A3Q01959 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A3Q01959 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.63■□□□□ 0.89
SLC6A3Q01959 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC6A3Q01959 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC6A3Q01959 PRKY-204ENST00000533551 1019 ntBASIC20.63■□□□□ 0.89
SLC6A3Q01959 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms