Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PRAMEP78395 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.84■□□□□ 0.77
PRAMEP78395 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEP78395 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.84■□□□□ 0.77
PRAMEP78395 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.84■□□□□ 0.77
PRAMEP78395 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.84■□□□□ 0.77
PRAMEP78395 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRAMEP78395 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRAMEP78395 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEP78395 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEP78395 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEP78395 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.83■□□□□ 0.77
PRAMEP78395 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEP78395 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEP78395 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEP78395 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEP78395 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.83■□□□□ 0.77
PRAMEP78395 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEP78395 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.83■□□□□ 0.77
PRAMEP78395 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.83■□□□□ 0.77
PRAMEP78395 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEP78395 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRAMEP78395 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEP78395 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.83■□□□□ 0.76
PRAMEP78395 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.83■□□□□ 0.76
PRAMEP78395 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEP78395 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.83■□□□□ 0.76
PRAMEP78395 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEP78395 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRAMEP78395 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.83■□□□□ 0.76
PRAMEP78395 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PRAMEP78395 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PRAMEP78395 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEP78395 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.82■□□□□ 0.76
PRAMEP78395 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEP78395 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEP78395 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PRAMEP78395 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEP78395 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEP78395 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.82■□□□□ 0.76
PRAMEP78395 AL138781.1-201ENST00000566567 1274 ntBASIC19.82■□□□□ 0.76
PRAMEP78395 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.82■□□□□ 0.76
PRAMEP78395 AC005829.2-201ENST00000571422 1056 ntBASIC19.82■□□□□ 0.76
PRAMEP78395 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.82■□□□□ 0.76
PRAMEP78395 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.82■□□□□ 0.76
PRAMEP78395 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.82■□□□□ 0.76
PRAMEP78395 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.82■□□□□ 0.76
PRAMEP78395 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEP78395 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEP78395 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEP78395 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEP78395 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PRAMEP78395 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRAMEP78395 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.82■□□□□ 0.76
PRAMEP78395 AL158211.5-201ENST00000623583 2518 ntBASIC19.81■□□□□ 0.76
PRAMEP78395 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PRAMEP78395 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
PRAMEP78395 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.81■□□□□ 0.76
PRAMEP78395 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PRAMEP78395 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PRAMEP78395 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.81■□□□□ 0.76
PRAMEP78395 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PRAMEP78395 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.81■□□□□ 0.76
PRAMEP78395 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEP78395 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.81■□□□□ 0.76
PRAMEP78395 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.81■□□□□ 0.76
PRAMEP78395 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.81■□□□□ 0.76
PRAMEP78395 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.81■□□□□ 0.76
PRAMEP78395 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEP78395 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEP78395 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PRAMEP78395 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEP78395 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.81■□□□□ 0.76
PRAMEP78395 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.81■□□□□ 0.76
PRAMEP78395 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
PRAMEP78395 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEP78395 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PRAMEP78395 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.81■□□□□ 0.76
PRAMEP78395 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.81■□□□□ 0.76
PRAMEP78395 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEP78395 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEP78395 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEP78395 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEP78395 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEP78395 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRAMEP78395 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEP78395 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEP78395 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRAMEP78395 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms