Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.48■■□□□ 1.03
SNRPFP62306 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.48■■□□□ 1.03
SNRPFP62306 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
SNRPFP62306 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.48■■□□□ 1.03
SNRPFP62306 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.48■■□□□ 1.03
SNRPFP62306 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNRPFP62306 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRPFP62306 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRPFP62306 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRPFP62306 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.47■■□□□ 1.03
SNRPFP62306 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRPFP62306 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRPFP62306 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRPFP62306 POU5F1P3-201ENST00000428824 1078 ntBASIC21.47■■□□□ 1.03
SNRPFP62306 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.47■■□□□ 1.03
SNRPFP62306 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.47■■□□□ 1.03
SNRPFP62306 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.47■■□□□ 1.03
SNRPFP62306 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.47■■□□□ 1.03
SNRPFP62306 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.47■■□□□ 1.03
SNRPFP62306 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SNRPFP62306 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
SNRPFP62306 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SNRPFP62306 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNRPFP62306 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
SNRPFP62306 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.47■■□□□ 1.03
SNRPFP62306 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNRPFP62306 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRPFP62306 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.46■■□□□ 1.03
SNRPFP62306 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRPFP62306 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRPFP62306 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.46■■□□□ 1.03
SNRPFP62306 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.46■■□□□ 1.03
SNRPFP62306 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRPFP62306 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SNRPFP62306 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRPFP62306 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SNRPFP62306 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
SNRPFP62306 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRPFP62306 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNRPFP62306 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRPFP62306 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.45■■□□□ 1.02
SNRPFP62306 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRPFP62306 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRPFP62306 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRPFP62306 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNRPFP62306 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.45■■□□□ 1.02
SNRPFP62306 KRT18P16-201ENST00000510337 1294 ntBASIC21.45■■□□□ 1.02
SNRPFP62306 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SNRPFP62306 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNRPFP62306 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SNRPFP62306 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SNRPFP62306 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.45■■□□□ 1.02
SNRPFP62306 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.44■■□□□ 1.02
SNRPFP62306 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.44■■□□□ 1.02
SNRPFP62306 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.44■■□□□ 1.02
SNRPFP62306 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SNRPFP62306 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
SNRPFP62306 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRPFP62306 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNRPFP62306 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.43■■□□□ 1.02
SNRPFP62306 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.43■■□□□ 1.02
SNRPFP62306 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNRPFP62306 PCDHAC2-203ENST00000615316 3011 ntBASIC21.43■■□□□ 1.02
SNRPFP62306 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNRPFP62306 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SNRPFP62306 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRPFP62306 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRPFP62306 AFG3L1P-217ENST00000557444 2447 ntBASIC21.43■■□□□ 1.02
SNRPFP62306 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNRPFP62306 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.43■■□□□ 1.02
SNRPFP62306 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.43■■□□□ 1.02
SNRPFP62306 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.43■■□□□ 1.02
SNRPFP62306 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.43■■□□□ 1.02
SNRPFP62306 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.43■■□□□ 1.02
SNRPFP62306 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.43■■□□□ 1.02
SNRPFP62306 RN7SL471P-201ENST00000580476 299 ntBASIC21.43■■□□□ 1.02
SNRPFP62306 MIR4651-201ENST00000582622 73 ntBASIC21.43■■□□□ 1.02
SNRPFP62306 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRPFP62306 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SNRPFP62306 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms