Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.7■■□□□ 1.06
PMS1P54277 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PMS1P54277 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.7■■□□□ 1.06
PMS1P54277 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMS1P54277 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMS1P54277 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMS1P54277 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.7■■□□□ 1.06
PMS1P54277 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PMS1P54277 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PMS1P54277 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PMS1P54277 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.69■■□□□ 1.06
PMS1P54277 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS1P54277 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.69■■□□□ 1.06
PMS1P54277 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.69■■□□□ 1.06
PMS1P54277 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.69■■□□□ 1.06
PMS1P54277 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.69■■□□□ 1.06
PMS1P54277 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.69■■□□□ 1.06
PMS1P54277 AC006557.6-201ENST00000623071 864 ntBASIC21.69■■□□□ 1.06
PMS1P54277 MYC-209ENST00000641252 345 ntBASIC21.69■■□□□ 1.06
PMS1P54277 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS1P54277 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS1P54277 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.69■■□□□ 1.06
PMS1P54277 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS1P54277 AP000974.1-201ENST00000623909 2387 ntBASIC21.69■■□□□ 1.06
PMS1P54277 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.69■■□□□ 1.06
PMS1P54277 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS1P54277 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.69■■□□□ 1.06
PMS1P54277 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS1P54277 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS1P54277 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PMS1P54277 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PMS1P54277 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMS1P54277 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.68■■□□□ 1.06
PMS1P54277 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMS1P54277 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PMS1P54277 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PMS1P54277 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.68■■□□□ 1.06
PMS1P54277 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.68■■□□□ 1.06
PMS1P54277 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.68■■□□□ 1.06
PMS1P54277 AL138781.1-201ENST00000566567 1274 ntBASIC21.68■■□□□ 1.06
PMS1P54277 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.68■■□□□ 1.06
PMS1P54277 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PMS1P54277 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PMS1P54277 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.68■■□□□ 1.06
PMS1P54277 AC018445.3-201ENST00000624177 1945 ntBASIC21.68■■□□□ 1.06
PMS1P54277 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PMS1P54277 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PMS1P54277 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PMS1P54277 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMS1P54277 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PMS1P54277 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMS1P54277 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PMS1P54277 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PMS1P54277 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.67■■□□□ 1.06
PMS1P54277 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PMS1P54277 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PMS1P54277 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.67■■□□□ 1.06
PMS1P54277 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMS1P54277 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMS1P54277 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PMS1P54277 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMS1P54277 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PMS1P54277 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.67■■□□□ 1.06
PMS1P54277 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PMS1P54277 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.67■■□□□ 1.06
PMS1P54277 AC073210.2-201ENST00000430369 194 ntBASIC21.67■■□□□ 1.06
PMS1P54277 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.67■■□□□ 1.06
PMS1P54277 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.67■■□□□ 1.06
PMS1P54277 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.67■■□□□ 1.06
PMS1P54277 AC092666.2-201ENST00000613287 246 ntBASIC21.67■■□□□ 1.06
PMS1P54277 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PMS1P54277 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.67■■□□□ 1.06
PMS1P54277 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PMS1P54277 AL032819.2-201ENST00000624543 2162 ntBASIC21.67■■□□□ 1.06
PMS1P54277 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PMS1P54277 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.66■■□□□ 1.06
PMS1P54277 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.66■■□□□ 1.06
PMS1P54277 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 TFP1-202ENST00000475455 1573 ntBASIC21.66■■□□□ 1.06
PMS1P54277 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.66■■□□□ 1.06
PMS1P54277 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.66■■□□□ 1.06
PMS1P54277 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.66■■□□□ 1.06
PMS1P54277 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PMS1P54277 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.66■■□□□ 1.06
PMS1P54277 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.66■■□□□ 1.06
PMS1P54277 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.66■■□□□ 1.06
PMS1P54277 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS1P54277 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS1P54277 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms