Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AL139384.1-201ENST00000612143 3047 ntBASIC16.93■□□□□ 0.3
CBX5P45973 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX5P45973 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX5P45973 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX5P45973 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX5P45973 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX5P45973 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX5P45973 AP001330.3-201ENST00000520123 633 ntBASIC16.93■□□□□ 0.3
CBX5P45973 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.93■□□□□ 0.3
CBX5P45973 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX5P45973 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX5P45973 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX5P45973 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX5P45973 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CBX5P45973 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX5P45973 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.93■□□□□ 0.3
CBX5P45973 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CBX5P45973 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX5P45973 Z82202.1-201ENST00000623446 1880 ntBASIC16.93■□□□□ 0.3
CBX5P45973 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.92■□□□□ 0.3
CBX5P45973 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CBX5P45973 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.92■□□□□ 0.3
CBX5P45973 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CBX5P45973 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.92■□□□□ 0.3
CBX5P45973 DUX4L2-201ENST00000561772 1275 ntBASIC16.92■□□□□ 0.3
CBX5P45973 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.92■□□□□ 0.3
CBX5P45973 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
CBX5P45973 DUX4L6-201ENST00000626483 1275 ntBASIC16.92■□□□□ 0.3
CBX5P45973 DUX4L1-201ENST00000627662 1275 ntBASIC16.92■□□□□ 0.3
CBX5P45973 DUX4L8-201ENST00000629013 1275 ntBASIC16.92■□□□□ 0.3
CBX5P45973 DUX4L3-201ENST00000630187 1275 ntBASIC16.92■□□□□ 0.3
CBX5P45973 DUX4L7-201ENST00000630678 1275 ntBASIC16.92■□□□□ 0.3
CBX5P45973 DUX4L5-201ENST00000630834 1275 ntBASIC16.92■□□□□ 0.3
CBX5P45973 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.92■□□□□ 0.3
CBX5P45973 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.92■□□□□ 0.3
CBX5P45973 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.92■□□□□ 0.3
CBX5P45973 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CBX5P45973 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX5P45973 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX5P45973 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX5P45973 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CBX5P45973 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX5P45973 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CBX5P45973 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX5P45973 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.91■□□□□ 0.3
CBX5P45973 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CBX5P45973 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CBX5P45973 PGM5P4-201ENST00000421970 445 ntBASIC16.91■□□□□ 0.3
CBX5P45973 AC091305.1-201ENST00000479476 895 ntBASIC16.91■□□□□ 0.3
CBX5P45973 PBX2P1-201ENST00000493219 1291 ntBASIC16.91■□□□□ 0.3
CBX5P45973 AC243732.1-201ENST00000612648 864 ntBASIC16.91■□□□□ 0.3
CBX5P45973 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX5P45973 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.91■□□□□ 0.3
CBX5P45973 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX5P45973 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX5P45973 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX5P45973 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX5P45973 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX5P45973 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX5P45973 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX5P45973 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX5P45973 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX5P45973 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX5P45973 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX5P45973 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 AC005332.8-201ENST00000622750 2735 ntBASIC16.9■□□□□ 0.3
CBX5P45973 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.9■□□□□ 0.3
CBX5P45973 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.9■□□□□ 0.3
CBX5P45973 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX5P45973 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms