Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CHRNA4P43681 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA4P43681 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRNA4P43681 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA4P43681 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHRNA4P43681 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA4P43681 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA4P43681 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHRNA4P43681 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA4P43681 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA4P43681 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA4P43681 UNC93B4-201ENST00000505679 747 ntBASIC19.9■□□□□ 0.78
CHRNA4P43681 AC008687.6-201ENST00000596318 630 ntBASIC19.9■□□□□ 0.78
CHRNA4P43681 AC008403.3-201ENST00000598924 454 ntBASIC19.9■□□□□ 0.78
CHRNA4P43681 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA4P43681 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.9■□□□□ 0.78
CHRNA4P43681 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA4P43681 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA4P43681 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA4P43681 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHRNA4P43681 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA4P43681 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA4P43681 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CHRNA4P43681 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CHRNA4P43681 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CHRNA4P43681 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA4P43681 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA4P43681 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA4P43681 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA4P43681 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CHRNA4P43681 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.89■□□□□ 0.77
CHRNA4P43681 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.89■□□□□ 0.77
CHRNA4P43681 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA4P43681 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.89■□□□□ 0.77
CHRNA4P43681 TFP1-202ENST00000475455 1573 ntBASIC19.89■□□□□ 0.77
CHRNA4P43681 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA4P43681 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CHRNA4P43681 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.89■□□□□ 0.77
CHRNA4P43681 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA4P43681 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA4P43681 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.89■□□□□ 0.77
CHRNA4P43681 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHRNA4P43681 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA4P43681 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA4P43681 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CHRNA4P43681 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA4P43681 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA4P43681 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHRNA4P43681 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA4P43681 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.88■□□□□ 0.77
CHRNA4P43681 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA4P43681 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA4P43681 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
CHRNA4P43681 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CHRNA4P43681 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.88■□□□□ 0.77
CHRNA4P43681 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.88■□□□□ 0.77
CHRNA4P43681 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.88■□□□□ 0.77
CHRNA4P43681 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA4P43681 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.88■□□□□ 0.77
CHRNA4P43681 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.88■□□□□ 0.77
CHRNA4P43681 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA4P43681 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA4P43681 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CHRNA4P43681 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CHRNA4P43681 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA4P43681 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA4P43681 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA4P43681 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA4P43681 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA4P43681 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHRNA4P43681 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA4P43681 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA4P43681 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA4P43681 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
CHRNA4P43681 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHRNA4P43681 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.87■□□□□ 0.77
CHRNA4P43681 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.87■□□□□ 0.77
CHRNA4P43681 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.87■□□□□ 0.77
CHRNA4P43681 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA4P43681 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.87■□□□□ 0.77
CHRNA4P43681 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.87■□□□□ 0.77
CHRNA4P43681 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA4P43681 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA4P43681 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA4P43681 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHRNA4P43681 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CHRNA4P43681 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.86■□□□□ 0.77
CHRNA4P43681 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHRNA4P43681 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CHRNA4P43681 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.86■□□□□ 0.77
CHRNA4P43681 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms