Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC1A1P43005 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SLC1A1P43005 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC1A1P43005 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A1P43005 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC1A1P43005 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A1P43005 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC1A1P43005 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A1P43005 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC1A1P43005 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A1P43005 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC1A1P43005 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SLC1A1P43005 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.63■□□□□ 0.89
SLC1A1P43005 AC073210.2-201ENST00000430369 194 ntBASIC20.63■□□□□ 0.89
SLC1A1P43005 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC1A1P43005 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC1A1P43005 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC1A1P43005 RAP2CP1-201ENST00000605103 478 ntBASIC20.63■□□□□ 0.89
SLC1A1P43005 AL137784.2-201ENST00000607332 1000 ntBASIC20.63■□□□□ 0.89
SLC1A1P43005 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A1P43005 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC1A1P43005 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A1P43005 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A1P43005 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A1P43005 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLC1A1P43005 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC1A1P43005 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC1A1P43005 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SLC1A1P43005 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC1A1P43005 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A1P43005 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SLC1A1P43005 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A1P43005 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC1A1P43005 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC1A1P43005 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A1P43005 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.62■□□□□ 0.89
SLC1A1P43005 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC1A1P43005 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC1A1P43005 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SLC1A1P43005 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A1P43005 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A1P43005 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC1A1P43005 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SLC1A1P43005 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC1A1P43005 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A1P43005 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
SLC1A1P43005 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SLC1A1P43005 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC1A1P43005 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A1P43005 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A1P43005 MIR663A-201ENST00000385250 93 ntBASIC20.61■□□□□ 0.89
SLC1A1P43005 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC1A1P43005 AL390719.1-204ENST00000412397 1219 ntBASIC20.61■□□□□ 0.89
SLC1A1P43005 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A1P43005 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SLC1A1P43005 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC1A1P43005 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC1A1P43005 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A1P43005 AC087289.5-201ENST00000586076 3175 ntBASIC20.61■□□□□ 0.89
SLC1A1P43005 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC1A1P43005 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC1A1P43005 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A1P43005 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC1A1P43005 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A1P43005 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC1A1P43005 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC1A1P43005 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC1A1P43005 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC1A1P43005 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC1A1P43005 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
SLC1A1P43005 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC1A1P43005 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
SLC1A1P43005 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLC1A1P43005 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC1A1P43005 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC1A1P43005 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLC1A1P43005 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC1A1P43005 AC005829.2-201ENST00000571422 1056 ntBASIC20.6■□□□□ 0.89
SLC1A1P43005 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC1A1P43005 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SLC1A1P43005 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC1A1P43005 AL032819.2-201ENST00000624543 2162 ntBASIC20.6■□□□□ 0.89
SLC1A1P43005 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC1A1P43005 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SLC1A1P43005 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A1P43005 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC1A1P43005 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SLC1A1P43005 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms