Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.04■□□□□ 0.48
RFC3P40938 AC073912.3-201ENST00000624414 853 ntBASIC18.04■□□□□ 0.48
RFC3P40938 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.04■□□□□ 0.48
RFC3P40938 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.04■□□□□ 0.48
RFC3P40938 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC3P40938 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC3P40938 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC3P40938 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.04■□□□□ 0.48
RFC3P40938 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC3P40938 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC3P40938 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC3P40938 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC3P40938 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC3P40938 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC3P40938 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.03■□□□□ 0.48
RFC3P40938 KRT17P2-201ENST00000300992 1314 ntBASIC18.03■□□□□ 0.48
RFC3P40938 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFC3P40938 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.03■□□□□ 0.48
RFC3P40938 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC3P40938 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RFC3P40938 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC3P40938 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC3P40938 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RFC3P40938 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.03■□□□□ 0.48
RFC3P40938 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RFC3P40938 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFC3P40938 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC3P40938 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC3P40938 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC3P40938 FAM197Y1-201ENST00000421178 764 ntBASIC18.03■□□□□ 0.48
RFC3P40938 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
RFC3P40938 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC3P40938 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RFC3P40938 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.03■□□□□ 0.48
RFC3P40938 MIR4785-201ENST00000585005 73 ntBASIC18.03■□□□□ 0.48
RFC3P40938 AC004264.1-201ENST00000608354 794 ntBASIC18.03■□□□□ 0.48
RFC3P40938 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.03■□□□□ 0.48
RFC3P40938 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RFC3P40938 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC3P40938 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC3P40938 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
RFC3P40938 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC3P40938 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
RFC3P40938 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.02■□□□□ 0.48
RFC3P40938 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFC3P40938 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFC3P40938 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFC3P40938 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFC3P40938 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFC3P40938 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RFC3P40938 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RFC3P40938 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RFC3P40938 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFC3P40938 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.02■□□□□ 0.48
RFC3P40938 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.02■□□□□ 0.48
RFC3P40938 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.02■□□□□ 0.48
RFC3P40938 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFC3P40938 REXO1L12P-201ENST00000622156 912 ntBASIC18.02■□□□□ 0.48
RFC3P40938 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RFC3P40938 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.02■□□□□ 0.47
RFC3P40938 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RFC3P40938 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
RFC3P40938 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.02■□□□□ 0.47
RFC3P40938 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.02■□□□□ 0.47
RFC3P40938 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.01■□□□□ 0.47
RFC3P40938 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RFC3P40938 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RFC3P40938 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
RFC3P40938 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.01■□□□□ 0.47
RFC3P40938 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.01■□□□□ 0.47
RFC3P40938 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.01■□□□□ 0.47
RFC3P40938 BX088651.1-201ENST00000540551 451 ntBASIC18.01■□□□□ 0.47
RFC3P40938 AL355075.4-201ENST00000554988 638 ntBASIC18.01■□□□□ 0.47
RFC3P40938 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.01■□□□□ 0.47
RFC3P40938 CD177P1-201ENST00000606252 935 ntBASIC18.01■□□□□ 0.47
RFC3P40938 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFC3P40938 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
RFC3P40938 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18■□□□□ 0.47
RFC3P40938 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
RFC3P40938 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RFC3P40938 KRT16P6-202ENST00000425692 1426 ntBASIC18■□□□□ 0.47
RFC3P40938 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFC3P40938 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms