Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL4A5P29400 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.84■■□□□ 1.41
COL4A5P29400 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
COL4A5P29400 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
COL4A5P29400 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL4A5P29400 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL4A5P29400 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL4A5P29400 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.84■■□□□ 1.41
COL4A5P29400 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL4A5P29400 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.84■■□□□ 1.41
COL4A5P29400 AL671277.2-201ENST00000458060 996 ntBASIC23.84■■□□□ 1.41
COL4A5P29400 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.84■■□□□ 1.41
COL4A5P29400 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL4A5P29400 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.84■■□□□ 1.41
COL4A5P29400 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
COL4A5P29400 AC008622.2-201ENST00000617006 1229 ntBASIC23.84■■□□□ 1.41
COL4A5P29400 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL4A5P29400 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL4A5P29400 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL4A5P29400 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL4A5P29400 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL4A5P29400 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL4A5P29400 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.83■■□□□ 1.41
COL4A5P29400 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL4A5P29400 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL4A5P29400 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.83■■□□□ 1.41
COL4A5P29400 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
COL4A5P29400 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.83■■□□□ 1.41
COL4A5P29400 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.83■■□□□ 1.41
COL4A5P29400 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.83■■□□□ 1.41
COL4A5P29400 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL4A5P29400 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL4A5P29400 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL4A5P29400 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.83■■□□□ 1.41
COL4A5P29400 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
COL4A5P29400 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL4A5P29400 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL4A5P29400 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
COL4A5P29400 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL4A5P29400 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL4A5P29400 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.83■■□□□ 1.4
COL4A5P29400 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.83■■□□□ 1.4
COL4A5P29400 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.83■■□□□ 1.4
COL4A5P29400 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL4A5P29400 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
COL4A5P29400 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL4A5P29400 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL4A5P29400 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.82■■□□□ 1.4
COL4A5P29400 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.82■■□□□ 1.4
COL4A5P29400 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL4A5P29400 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL4A5P29400 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL4A5P29400 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
COL4A5P29400 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.82■■□□□ 1.4
COL4A5P29400 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.82■■□□□ 1.4
COL4A5P29400 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.82■■□□□ 1.4
COL4A5P29400 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
COL4A5P29400 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A5P29400 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A5P29400 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A5P29400 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A5P29400 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A5P29400 AC026396.1-201ENST00000419388 421 ntBASIC23.81■■□□□ 1.4
COL4A5P29400 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.81■■□□□ 1.4
COL4A5P29400 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.81■■□□□ 1.4
COL4A5P29400 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A5P29400 FBXW4P1-201ENST00000426721 2239 ntBASIC23.81■■□□□ 1.4
COL4A5P29400 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A5P29400 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A5P29400 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A5P29400 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A5P29400 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A5P29400 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A5P29400 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.8■■□□□ 1.4
COL4A5P29400 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.8■■□□□ 1.4
COL4A5P29400 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.8■■□□□ 1.4
COL4A5P29400 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.8■■□□□ 1.4
COL4A5P29400 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.8■■□□□ 1.4
COL4A5P29400 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC23.8■■□□□ 1.4
COL4A5P29400 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.8■■□□□ 1.4
COL4A5P29400 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.8■■□□□ 1.4
COL4A5P29400 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A5P29400 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
COL4A5P29400 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A5P29400 PHGDH-210ENST00000641115 1638 ntBASIC23.8■■□□□ 1.4
COL4A5P29400 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.8■■□□□ 1.4
COL4A5P29400 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A5P29400 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A5P29400 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.8■■□□□ 1.4
COL4A5P29400 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.8■■□□□ 1.4
COL4A5P29400 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.8■■□□□ 1.4
COL4A5P29400 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A5P29400 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.8■■□□□ 1.4
COL4A5P29400 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL4A5P29400 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL4A5P29400 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC23.79■■□□□ 1.4
COL4A5P29400 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.79■■□□□ 1.4
COL4A5P29400 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.79■■□□□ 1.4
COL4A5P29400 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.79■■□□□ 1.4
COL4A5P29400 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms