Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC1P29353 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.04■□□□□ 0.48
SHC1P29353 AC023632.3-201ENST00000521633 145 ntBASIC18.04■□□□□ 0.48
SHC1P29353 UNC93B5-201ENST00000530315 699 ntBASIC18.04■□□□□ 0.48
SHC1P29353 AC005829.2-201ENST00000571422 1056 ntBASIC18.04■□□□□ 0.48
SHC1P29353 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.04■□□□□ 0.48
SHC1P29353 AL031963.3-201ENST00000606441 850 ntBASIC18.04■□□□□ 0.48
SHC1P29353 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC1P29353 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC1P29353 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC1P29353 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC1P29353 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC1P29353 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC1P29353 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC1P29353 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SHC1P29353 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.03■□□□□ 0.48
SHC1P29353 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.03■□□□□ 0.48
SHC1P29353 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC1P29353 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SHC1P29353 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SHC1P29353 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SHC1P29353 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC1P29353 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SHC1P29353 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC1P29353 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.03■□□□□ 0.48
SHC1P29353 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.03■□□□□ 0.48
SHC1P29353 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
SHC1P29353 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC1P29353 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.03■□□□□ 0.48
SHC1P29353 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC1P29353 SOX15-203ENST00000570788 1093 ntBASIC18.03■□□□□ 0.48
SHC1P29353 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.03■□□□□ 0.48
SHC1P29353 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SHC1P29353 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC1P29353 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 KRT8P17-201ENST00000453110 1448 ntBASIC18.03■□□□□ 0.48
SHC1P29353 AC018445.3-201ENST00000624177 1945 ntBASIC18.03■□□□□ 0.48
SHC1P29353 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC1P29353 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.03■□□□□ 0.48
SHC1P29353 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC1P29353 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.02■□□□□ 0.48
SHC1P29353 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SHC1P29353 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC1P29353 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SHC1P29353 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.02■□□□□ 0.48
SHC1P29353 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SHC1P29353 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC1P29353 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC1P29353 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
SHC1P29353 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC1P29353 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC1P29353 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.02■□□□□ 0.48
SHC1P29353 AC098818.2-201ENST00000564925 2320 ntBASIC18.02■□□□□ 0.48
SHC1P29353 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC1P29353 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.02■□□□□ 0.47
SHC1P29353 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
SHC1P29353 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SHC1P29353 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SHC1P29353 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SHC1P29353 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.01■□□□□ 0.47
SHC1P29353 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.01■□□□□ 0.47
SHC1P29353 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SHC1P29353 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
SHC1P29353 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHC1P29353 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHC1P29353 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHC1P29353 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.01■□□□□ 0.47
SHC1P29353 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHC1P29353 KRT8P20-201ENST00000423953 1409 ntBASIC18.01■□□□□ 0.47
SHC1P29353 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHC1P29353 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHC1P29353 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.01■□□□□ 0.47
SHC1P29353 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.01■□□□□ 0.47
SHC1P29353 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SHC1P29353 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms