Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RXRBP28702 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RXRBP28702 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RXRBP28702 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RXRBP28702 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RXRBP28702 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RXRBP28702 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
RXRBP28702 PTBP1P-201ENST00000554374 1601 ntBASIC26.04■■□□□ 1.76
RXRBP28702 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.04■■□□□ 1.76
RXRBP28702 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC26.04■■□□□ 1.76
RXRBP28702 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC26.04■■□□□ 1.76
RXRBP28702 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC26.04■■□□□ 1.76
RXRBP28702 BMF-207ENST00000559701 630 ntTSL 3 BASIC26.04■■□□□ 1.76
RXRBP28702 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC26.04■■□□□ 1.76
RXRBP28702 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RXRBP28702 FAM99A-202ENST00000538190 1989 ntBASIC26.04■■□□□ 1.76
RXRBP28702 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
RXRBP28702 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
RXRBP28702 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RXRBP28702 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RXRBP28702 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RXRBP28702 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RXRBP28702 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
RXRBP28702 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC26.03■■□□□ 1.76
RXRBP28702 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC26.03■■□□□ 1.76
RXRBP28702 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC26.03■■□□□ 1.76
RXRBP28702 AL121912.1-201ENST00000603683 238 ntBASIC26.03■■□□□ 1.76
RXRBP28702 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC26.03■■□□□ 1.76
RXRBP28702 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
RXRBP28702 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RXRBP28702 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.03■■□□□ 1.76
RXRBP28702 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC26.03■■□□□ 1.76
RXRBP28702 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC26.02■■□□□ 1.76
RXRBP28702 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RXRBP28702 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC26.02■■□□□ 1.76
RXRBP28702 PHB2-202ENST00000440277 996 ntTSL 5 BASIC26.02■■□□□ 1.76
RXRBP28702 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RXRBP28702 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RXRBP28702 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RXRBP28702 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RXRBP28702 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RXRBP28702 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC26.02■■□□□ 1.76
RXRBP28702 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC26.02■■□□□ 1.76
RXRBP28702 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RXRBP28702 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.02■■□□□ 1.76
RXRBP28702 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RXRBP28702 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RXRBP28702 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RXRBP28702 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RXRBP28702 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC26.01■■□□□ 1.75
RXRBP28702 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.01■■□□□ 1.75
RXRBP28702 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RXRBP28702 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RXRBP28702 KRT18P31-201ENST00000506277 1292 ntBASIC26.01■■□□□ 1.75
RXRBP28702 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC26.01■■□□□ 1.75
RXRBP28702 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC26.01■■□□□ 1.75
RXRBP28702 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC26.01■■□□□ 1.75
RXRBP28702 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RXRBP28702 MPI-205ENST00000562606 1052 ntTSL 3 BASIC26.01■■□□□ 1.75
RXRBP28702 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.01■■□□□ 1.75
RXRBP28702 AC020928.2-201ENST00000588717 2197 ntBASIC26.01■■□□□ 1.75
RXRBP28702 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
RXRBP28702 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
RXRBP28702 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC26■■□□□ 1.75
RXRBP28702 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC26■■□□□ 1.75
RXRBP28702 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
RXRBP28702 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC26■■□□□ 1.75
RXRBP28702 DERL1-203ENST00000419562 918 ntTSL 2 BASIC26■■□□□ 1.75
RXRBP28702 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC26■■□□□ 1.75
RXRBP28702 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC26■■□□□ 1.75
RXRBP28702 PNN-202ENST00000553331 656 ntTSL 3 BASIC26■■□□□ 1.75
RXRBP28702 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC26■■□□□ 1.75
RXRBP28702 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC26■■□□□ 1.75
RXRBP28702 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
RXRBP28702 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
RXRBP28702 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.99■■□□□ 1.75
RXRBP28702 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RXRBP28702 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RXRBP28702 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RXRBP28702 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RXRBP28702 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RXRBP28702 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC25.99■■□□□ 1.75
RXRBP28702 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC25.99■■□□□ 1.75
RXRBP28702 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC25.99■■□□□ 1.75
RXRBP28702 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RXRBP28702 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RXRBP28702 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RXRBP28702 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.98■■□□□ 1.75
RXRBP28702 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC25.98■■□□□ 1.75
RXRBP28702 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.98■■□□□ 1.75
RXRBP28702 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.98■■□□□ 1.75
RXRBP28702 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
RXRBP28702 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.98■■□□□ 1.75
RXRBP28702 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
RXRBP28702 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC25.98■■□□□ 1.75
RXRBP28702 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC25.98■■□□□ 1.75
RXRBP28702 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RXRBP28702 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
RXRBP28702 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RXRBP28702 FOSL1P1-201ENST00000511041 816 ntBASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms