Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
XPAP23025 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.89■□□□□ 0.77
XPAP23025 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.89■□□□□ 0.77
XPAP23025 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.89■□□□□ 0.77
XPAP23025 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
XPAP23025 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
XPAP23025 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
XPAP23025 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.89■□□□□ 0.77
XPAP23025 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.89■□□□□ 0.77
XPAP23025 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.89■□□□□ 0.77
XPAP23025 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.89■□□□□ 0.77
XPAP23025 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
XPAP23025 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.89■□□□□ 0.77
XPAP23025 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.89■□□□□ 0.77
XPAP23025 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
XPAP23025 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.88■□□□□ 0.77
XPAP23025 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.88■□□□□ 0.77
XPAP23025 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.88■□□□□ 0.77
XPAP23025 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
XPAP23025 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
XPAP23025 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
XPAP23025 AC018553.1-201ENST00000616682 1458 ntBASIC19.88■□□□□ 0.77
XPAP23025 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
XPAP23025 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
XPAP23025 RPS2P4-201ENST00000476944 856 ntBASIC19.88■□□□□ 0.77
XPAP23025 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
XPAP23025 AC008550.1-201ENST00000511500 884 ntBASIC19.88■□□□□ 0.77
XPAP23025 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.88■□□□□ 0.77
XPAP23025 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
XPAP23025 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.88■□□□□ 0.77
XPAP23025 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.88■□□□□ 0.77
XPAP23025 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.88■□□□□ 0.77
XPAP23025 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.88■□□□□ 0.77
XPAP23025 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.88■□□□□ 0.77
XPAP23025 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
XPAP23025 AL512408.1-201ENST00000569378 2000 ntBASIC19.88■□□□□ 0.77
XPAP23025 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
XPAP23025 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
XPAP23025 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
XPAP23025 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.87■□□□□ 0.77
XPAP23025 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 AC116351.2-201ENST00000606540 1585 ntBASIC19.87■□□□□ 0.77
XPAP23025 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 AP006587.1-201ENST00000534129 1502 ntBASIC19.87■□□□□ 0.77
XPAP23025 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.87■□□□□ 0.77
XPAP23025 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
XPAP23025 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.87■□□□□ 0.77
XPAP23025 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.87■□□□□ 0.77
XPAP23025 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
XPAP23025 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.87■□□□□ 0.77
XPAP23025 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.87■□□□□ 0.77
XPAP23025 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
XPAP23025 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
XPAP23025 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
XPAP23025 AC092667.1-201ENST00000434301 2586 ntBASIC19.87■□□□□ 0.77
XPAP23025 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.86■□□□□ 0.77
XPAP23025 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
XPAP23025 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.86■□□□□ 0.77
XPAP23025 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
XPAP23025 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.86■□□□□ 0.77
XPAP23025 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.86■□□□□ 0.77
XPAP23025 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.86■□□□□ 0.77
XPAP23025 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.86■□□□□ 0.77
XPAP23025 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
XPAP23025 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
XPAP23025 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
XPAP23025 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XPAP23025 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.85■□□□□ 0.77
XPAP23025 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XPAP23025 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.85■□□□□ 0.77
XPAP23025 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.85■□□□□ 0.77
XPAP23025 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XPAP23025 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
XPAP23025 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
XPAP23025 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XPAP23025 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
XPAP23025 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
XPAP23025 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms