Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ACANP16112 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.22■□□□□ 0.19
ACANP16112 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ACANP16112 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ACANP16112 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ACANP16112 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ACANP16112 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ACANP16112 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ACANP16112 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ACANP16112 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ACANP16112 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.22■□□□□ 0.19
ACANP16112 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ACANP16112 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.22■□□□□ 0.19
ACANP16112 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ACANP16112 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.21■□□□□ 0.19
ACANP16112 EMBP1-201ENST00000458200 901 ntBASIC16.21■□□□□ 0.19
ACANP16112 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.21■□□□□ 0.19
ACANP16112 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.21■□□□□ 0.19
ACANP16112 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ACANP16112 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ACANP16112 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.21■□□□□ 0.19
ACANP16112 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ACANP16112 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ACANP16112 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ACANP16112 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ACANP16112 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
ACANP16112 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.21■□□□□ 0.19
ACANP16112 AC104692.2-201ENST00000603054 253 ntBASIC16.21■□□□□ 0.19
ACANP16112 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ACANP16112 AC011298.2-201ENST00000617989 482 ntBASIC16.21■□□□□ 0.19
ACANP16112 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.21■□□□□ 0.19
ACANP16112 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.21■□□□□ 0.19
ACANP16112 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.21■□□□□ 0.19
ACANP16112 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
ACANP16112 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.21■□□□□ 0.18
ACANP16112 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ACANP16112 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ACANP16112 AC004980.1-204ENST00000429707 299 ntBASIC16.2■□□□□ 0.18
ACANP16112 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.2■□□□□ 0.18
ACANP16112 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ACANP16112 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ACANP16112 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.2■□□□□ 0.18
ACANP16112 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ACANP16112 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
ACANP16112 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.19■□□□□ 0.18
ACANP16112 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ACANP16112 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ACANP16112 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.19■□□□□ 0.18
ACANP16112 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.19■□□□□ 0.18
ACANP16112 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.19■□□□□ 0.18
ACANP16112 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.19■□□□□ 0.18
ACANP16112 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.19■□□□□ 0.18
ACANP16112 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.19■□□□□ 0.18
ACANP16112 AL732292.2-201ENST00000609649 430 ntBASIC16.19■□□□□ 0.18
ACANP16112 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ACANP16112 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ACANP16112 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ACANP16112 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ACANP16112 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.19■□□□□ 0.18
ACANP16112 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.19■□□□□ 0.18
ACANP16112 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ACANP16112 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.19■□□□□ 0.18
ACANP16112 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.19■□□□□ 0.18
ACANP16112 AC131212.4-201ENST00000623606 975 ntBASIC16.19■□□□□ 0.18
ACANP16112 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.19■□□□□ 0.18
ACANP16112 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ACANP16112 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.19■□□□□ 0.18
ACANP16112 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.18■□□□□ 0.18
ACANP16112 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.18■□□□□ 0.18
ACANP16112 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.18■□□□□ 0.18
ACANP16112 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.18■□□□□ 0.18
ACANP16112 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ACANP16112 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
ACANP16112 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.18■□□□□ 0.18
ACANP16112 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ACANP16112 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ACANP16112 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ACANP16112 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms