Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
TOP2AP11388 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC34.72■■■■□ 3.15
TOP2AP11388 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC34.71■■■■□ 3.15
TOP2AP11388 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC34.71■■■■□ 3.15
TOP2AP11388 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC34.71■■■■□ 3.15
TOP2AP11388 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC34.71■■■■□ 3.15
TOP2AP11388 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC34.71■■■■□ 3.15
TOP2AP11388 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
TOP2AP11388 BX119927.1-201ENST00000636596 1552 ntBASIC34.71■■■■□ 3.15
TOP2AP11388 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
TOP2AP11388 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC34.71■■■■□ 3.15
TOP2AP11388 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
TOP2AP11388 COPS8-203ENST00000409334 794 ntTSL 5 BASIC34.71■■■■□ 3.15
TOP2AP11388 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC34.71■■■■□ 3.15
TOP2AP11388 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC34.71■■■■□ 3.15
TOP2AP11388 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC34.71■■■■□ 3.15
TOP2AP11388 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC34.7■■■■□ 3.15
TOP2AP11388 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC34.7■■■■□ 3.15
TOP2AP11388 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC34.7■■■■□ 3.15
TOP2AP11388 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC34.7■■■■□ 3.14
TOP2AP11388 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.14
TOP2AP11388 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC34.7■■■■□ 3.14
TOP2AP11388 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC34.7■■■■□ 3.14
TOP2AP11388 AC091076.1-201ENST00000610741 619 ntBASIC34.7■■■■□ 3.14
TOP2AP11388 WWC2-AS2-201ENST00000578387 2183 ntBASIC34.69■■■■□ 3.14
TOP2AP11388 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
TOP2AP11388 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC34.69■■■■□ 3.14
TOP2AP11388 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC34.69■■■■□ 3.14
TOP2AP11388 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC34.69■■■■□ 3.14
TOP2AP11388 ANKRD20A18P-201ENST00000359341 492 ntBASIC34.69■■■■□ 3.14
TOP2AP11388 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
TOP2AP11388 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC34.69■■■■□ 3.14
TOP2AP11388 GXYLT1P6-201ENST00000456472 1187 ntBASIC34.69■■■■□ 3.14
TOP2AP11388 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC34.69■■■■□ 3.14
TOP2AP11388 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
TOP2AP11388 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
TOP2AP11388 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
TOP2AP11388 RNF152P1-201ENST00000397754 604 ntBASIC34.68■■■■□ 3.14
TOP2AP11388 CD70-202ENST00000423145 881 ntTSL 2 BASIC34.68■■■■□ 3.14
TOP2AP11388 KRT8P8-201ENST00000434750 1448 ntBASIC34.68■■■■□ 3.14
TOP2AP11388 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC34.68■■■■□ 3.14
TOP2AP11388 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC34.68■■■■□ 3.14
TOP2AP11388 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC34.67■■■■□ 3.14
TOP2AP11388 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC34.67■■■■□ 3.14
TOP2AP11388 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC34.67■■■■□ 3.14
TOP2AP11388 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC34.67■■■■□ 3.14
TOP2AP11388 GPX4-207ENST00000589115 812 ntTSL 2 BASIC34.67■■■■□ 3.14
TOP2AP11388 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC34.67■■■■□ 3.14
TOP2AP11388 AC141257.4-201ENST00000634557 245 ntBASIC34.67■■■■□ 3.14
TOP2AP11388 AC136944.6-201ENST00000634818 245 ntBASIC34.67■■■■□ 3.14
TOP2AP11388 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC34.67■■■■□ 3.14
TOP2AP11388 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC34.67■■■■□ 3.14
TOP2AP11388 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
TOP2AP11388 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC34.67■■■■□ 3.14
TOP2AP11388 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC34.67■■■■□ 3.14
TOP2AP11388 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
TOP2AP11388 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
TOP2AP11388 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
TOP2AP11388 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC34.66■■■■□ 3.14
TOP2AP11388 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
TOP2AP11388 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC34.66■■■■□ 3.14
TOP2AP11388 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
TOP2AP11388 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
TOP2AP11388 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC34.66■■■■□ 3.14
TOP2AP11388 AC008622.2-201ENST00000617006 1229 ntBASIC34.66■■■■□ 3.14
TOP2AP11388 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC34.66■■■■□ 3.14
TOP2AP11388 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
TOP2AP11388 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC34.66■■■■□ 3.14
TOP2AP11388 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC34.66■■■■□ 3.14
TOP2AP11388 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC34.66■■■■□ 3.14
TOP2AP11388 BET1L-202ENST00000332865 533 ntTSL 5 BASIC34.65■■■■□ 3.14
TOP2AP11388 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC34.65■■■■□ 3.14
TOP2AP11388 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC34.65■■■■□ 3.14
TOP2AP11388 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC34.65■■■■□ 3.14
TOP2AP11388 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
TOP2AP11388 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC34.65■■■■□ 3.14
TOP2AP11388 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC34.65■■■■□ 3.14
TOP2AP11388 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
TOP2AP11388 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC34.65■■■■□ 3.14
TOP2AP11388 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
TOP2AP11388 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
TOP2AP11388 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
TOP2AP11388 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
TOP2AP11388 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC34.65■■■■□ 3.14
TOP2AP11388 AP000550.4-202ENST00000639755 178 ntBASIC34.65■■■■□ 3.14
TOP2AP11388 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
TOP2AP11388 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC34.65■■■■□ 3.14
TOP2AP11388 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC34.65■■■■□ 3.14
TOP2AP11388 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
TOP2AP11388 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
TOP2AP11388 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
TOP2AP11388 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
TOP2AP11388 AC009947.2-201ENST00000444014 672 ntBASIC34.64■■■■□ 3.14
TOP2AP11388 COX11P1-201ENST00000489116 835 ntBASIC34.64■■■■□ 3.14
TOP2AP11388 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC34.64■■■■□ 3.14
TOP2AP11388 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC34.64■■■■□ 3.14
TOP2AP11388 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
TOP2AP11388 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
TOP2AP11388 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC34.63■■■■□ 3.13
TOP2AP11388 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC34.63■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms