Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HNRNPCL4P0DMR1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HNRNPCL4P0DMR1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 AL137784.2-201ENST00000607332 1000 ntBASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 IKBKGP1-201ENST00000612193 1073 ntBASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 AL050303.2-201ENST00000619798 666 ntBASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 BX323043.1-201ENST00000641006 1765 ntBASIC18.3■□□□□ 0.52
HNRNPCL4P0DMR1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 BX276092.2-201ENST00000417668 665 ntBASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.29■□□□□ 0.52
HNRNPCL4P0DMR1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HNRNPCL4P0DMR1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.27■□□□□ 0.52
HNRNPCL4P0DMR1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.27■□□□□ 0.51
HNRNPCL4P0DMR1 AC018445.3-201ENST00000624177 1945 ntBASIC18.27■□□□□ 0.51
HNRNPCL4P0DMR1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HNRNPCL4P0DMR1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HNRNPCL4P0DMR1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms