Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MMP2P08253 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
MMP2P08253 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP2P08253 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP2P08253 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.89■□□□□ 0.77
MMP2P08253 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
MMP2P08253 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP2P08253 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
MMP2P08253 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.89■□□□□ 0.77
MMP2P08253 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
MMP2P08253 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP2P08253 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MMP2P08253 AC006058.3-201ENST00000606217 1069 ntBASIC19.89■□□□□ 0.77
MMP2P08253 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.89■□□□□ 0.77
MMP2P08253 AC073648.6-201ENST00000641589 218 ntBASIC19.89■□□□□ 0.77
MMP2P08253 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MMP2P08253 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP2P08253 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MMP2P08253 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MMP2P08253 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MMP2P08253 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MMP2P08253 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MMP2P08253 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.88■□□□□ 0.77
MMP2P08253 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
MMP2P08253 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.88■□□□□ 0.77
MMP2P08253 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.88■□□□□ 0.77
MMP2P08253 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.88■□□□□ 0.77
MMP2P08253 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MMP2P08253 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP2P08253 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MMP2P08253 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.88■□□□□ 0.77
MMP2P08253 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MMP2P08253 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.88■□□□□ 0.77
MMP2P08253 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP2P08253 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MMP2P08253 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP2P08253 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP2P08253 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
MMP2P08253 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP2P08253 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MMP2P08253 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.87■□□□□ 0.77
MMP2P08253 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MMP2P08253 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MMP2P08253 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP2P08253 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP2P08253 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP2P08253 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
MMP2P08253 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP2P08253 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.87■□□□□ 0.77
MMP2P08253 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MMP2P08253 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP2P08253 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.87■□□□□ 0.77
MMP2P08253 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.87■□□□□ 0.77
MMP2P08253 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP2P08253 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
MMP2P08253 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MMP2P08253 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP2P08253 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP2P08253 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MMP2P08253 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.87■□□□□ 0.77
MMP2P08253 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.86■□□□□ 0.77
MMP2P08253 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.86■□□□□ 0.77
MMP2P08253 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 AC128676.1-201ENST00000454392 318 ntBASIC19.86■□□□□ 0.77
MMP2P08253 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.86■□□□□ 0.77
MMP2P08253 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.86■□□□□ 0.77
MMP2P08253 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.86■□□□□ 0.77
MMP2P08253 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MMP2P08253 AP006587.1-201ENST00000534129 1502 ntBASIC19.86■□□□□ 0.77
MMP2P08253 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MMP2P08253 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP2P08253 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MMP2P08253 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP2P08253 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.85■□□□□ 0.77
MMP2P08253 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP2P08253 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MMP2P08253 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP2P08253 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.85■□□□□ 0.77
MMP2P08253 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP2P08253 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP2P08253 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP2P08253 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP2P08253 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.85■□□□□ 0.77
MMP2P08253 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
MMP2P08253 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
MMP2P08253 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP2P08253 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.85■□□□□ 0.77
MMP2P08253 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP2P08253 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms