Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGN1P05114 AC016405.3-201ENST00000607710 860 ntBASIC17.84■□□□□ 0.45
HMGN1P05114 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGN1P05114 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGN1P05114 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGN1P05114 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGN1P05114 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.84■□□□□ 0.45
HMGN1P05114 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.84■□□□□ 0.45
HMGN1P05114 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HMGN1P05114 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGN1P05114 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HMGN1P05114 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.83■□□□□ 0.45
HMGN1P05114 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMGN1P05114 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.83■□□□□ 0.45
HMGN1P05114 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMGN1P05114 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HMGN1P05114 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGN1P05114 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGN1P05114 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.83■□□□□ 0.44
HMGN1P05114 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.83■□□□□ 0.44
HMGN1P05114 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.83■□□□□ 0.44
HMGN1P05114 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGN1P05114 KRT18P61-201ENST00000585825 1298 ntBASIC17.83■□□□□ 0.44
HMGN1P05114 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGN1P05114 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HMGN1P05114 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HMGN1P05114 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.83■□□□□ 0.44
HMGN1P05114 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGN1P05114 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGN1P05114 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGN1P05114 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMGN1P05114 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGN1P05114 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HMGN1P05114 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGN1P05114 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGN1P05114 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGN1P05114 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGN1P05114 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HMGN1P05114 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGN1P05114 KRT18P11-201ENST00000435214 1283 ntBASIC17.82■□□□□ 0.44
HMGN1P05114 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGN1P05114 MFSD11-216ENST00000590393 1141 ntBASIC17.82■□□□□ 0.44
HMGN1P05114 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGN1P05114 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGN1P05114 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGN1P05114 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
HMGN1P05114 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGN1P05114 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HMGN1P05114 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.81■□□□□ 0.44
HMGN1P05114 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 RARRES2P4-201ENST00000514074 484 ntBASIC17.81■□□□□ 0.44
HMGN1P05114 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGN1P05114 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.81■□□□□ 0.44
HMGN1P05114 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HMGN1P05114 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HMGN1P05114 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HMGN1P05114 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
HMGN1P05114 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HMGN1P05114 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGN1P05114 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGN1P05114 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGN1P05114 LINC01465-201ENST00000408887 1940 ntBASIC17.8■□□□□ 0.44
HMGN1P05114 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HMGN1P05114 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HMGN1P05114 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HMGN1P05114 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms