Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 AC133041.1-202ENST00000642053 222 ntBASIC20.04■□□□□ 0.8
MT-ND3P03897 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
MT-ND3P03897 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.04■□□□□ 0.8
MT-ND3P03897 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.04■□□□□ 0.8
MT-ND3P03897 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-ND3P03897 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MT-ND3P03897 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.03■□□□□ 0.8
MT-ND3P03897 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MT-ND3P03897 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MT-ND3P03897 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.03■□□□□ 0.8
MT-ND3P03897 CDV3P1-201ENST00000471403 739 ntBASIC20.03■□□□□ 0.8
MT-ND3P03897 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.03■□□□□ 0.8
MT-ND3P03897 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.03■□□□□ 0.8
MT-ND3P03897 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.03■□□□□ 0.8
MT-ND3P03897 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.03■□□□□ 0.8
MT-ND3P03897 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
MT-ND3P03897 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MT-ND3P03897 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
MT-ND3P03897 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MT-ND3P03897 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.02■□□□□ 0.8
MT-ND3P03897 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
MT-ND3P03897 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.02■□□□□ 0.8
MT-ND3P03897 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 AC073210.2-201ENST00000430369 194 ntBASIC20.02■□□□□ 0.8
MT-ND3P03897 AC008694.1-202ENST00000636953 945 ntBASIC20.02■□□□□ 0.8
MT-ND3P03897 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.02■□□□□ 0.8
MT-ND3P03897 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MT-ND3P03897 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.02■□□□□ 0.79
MT-ND3P03897 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.02■□□□□ 0.79
MT-ND3P03897 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MT-ND3P03897 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
MT-ND3P03897 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.01■□□□□ 0.79
MT-ND3P03897 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.01■□□□□ 0.79
MT-ND3P03897 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND3P03897 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND3P03897 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
MT-ND3P03897 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND3P03897 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MT-ND3P03897 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
MT-ND3P03897 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND3P03897 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND3P03897 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MT-ND3P03897 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MT-ND3P03897 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND3P03897 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND3P03897 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MT-ND3P03897 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND3P03897 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20■□□□□ 0.79
MT-ND3P03897 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND3P03897 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
MT-ND3P03897 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20■□□□□ 0.79
MT-ND3P03897 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND3P03897 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20■□□□□ 0.79
MT-ND3P03897 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MT-ND3P03897 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND3P03897 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
MT-ND3P03897 PGM5P4-201ENST00000421970 445 ntBASIC20■□□□□ 0.79
MT-ND3P03897 AC069152.1-201ENST00000438030 544 ntBASIC20■□□□□ 0.79
MT-ND3P03897 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
MT-ND3P03897 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20■□□□□ 0.79
MT-ND3P03897 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20■□□□□ 0.79
MT-ND3P03897 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
MT-ND3P03897 AC069236.1-201ENST00000604339 616 ntBASIC20■□□□□ 0.79
MT-ND3P03897 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20■□□□□ 0.79
MT-ND3P03897 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
MT-ND3P03897 OR10C1-204ENST00000622521 1039 ntBASIC20■□□□□ 0.79
MT-ND3P03897 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
MT-ND3P03897 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20■□□□□ 0.79
MT-ND3P03897 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
MT-ND3P03897 Z82202.1-201ENST00000623446 1880 ntBASIC20■□□□□ 0.79
MT-ND3P03897 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND3P03897 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND3P03897 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND3P03897 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MT-ND3P03897 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms