Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 KRT18P29-201ENST00000397031 1267 ntBASIC20.68■□□□□ 0.9
TRUB2O95900 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.68■□□□□ 0.9
TRUB2O95900 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.68■□□□□ 0.9
TRUB2O95900 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.68■□□□□ 0.9
TRUB2O95900 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.68■□□□□ 0.9
TRUB2O95900 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.68■□□□□ 0.9
TRUB2O95900 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRUB2O95900 AL158211.5-201ENST00000623583 2518 ntBASIC20.68■□□□□ 0.9
TRUB2O95900 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.68■□□□□ 0.9
TRUB2O95900 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.67■□□□□ 0.9
TRUB2O95900 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB2O95900 PHGDH-210ENST00000641115 1638 ntBASIC20.67■□□□□ 0.9
TRUB2O95900 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB2O95900 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.67■□□□□ 0.9
TRUB2O95900 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB2O95900 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB2O95900 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB2O95900 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRUB2O95900 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRUB2O95900 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB2O95900 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB2O95900 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.67■□□□□ 0.9
TRUB2O95900 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB2O95900 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.67■□□□□ 0.9
TRUB2O95900 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB2O95900 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.67■□□□□ 0.9
TRUB2O95900 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB2O95900 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB2O95900 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.67■□□□□ 0.9
TRUB2O95900 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRUB2O95900 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRUB2O95900 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB2O95900 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB2O95900 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB2O95900 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
TRUB2O95900 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.66■□□□□ 0.9
TRUB2O95900 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.66■□□□□ 0.9
TRUB2O95900 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRUB2O95900 AL121829.2-201ENST00000620908 328 ntBASIC20.66■□□□□ 0.9
TRUB2O95900 AL121906.2-201ENST00000621597 723 ntBASIC20.66■□□□□ 0.9
TRUB2O95900 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB2O95900 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB2O95900 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB2O95900 AP001271.2-201ENST00000624018 1556 ntBASIC20.66■□□□□ 0.9
TRUB2O95900 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB2O95900 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.66■□□□□ 0.9
TRUB2O95900 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB2O95900 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRUB2O95900 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.66■□□□□ 0.9
TRUB2O95900 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.65■□□□□ 0.9
TRUB2O95900 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.65■□□□□ 0.9
TRUB2O95900 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.65■□□□□ 0.9
TRUB2O95900 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 AC116351.2-201ENST00000606540 1585 ntBASIC20.65■□□□□ 0.9
TRUB2O95900 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRUB2O95900 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.65■□□□□ 0.9
TRUB2O95900 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.65■□□□□ 0.9
TRUB2O95900 MTDHP1-201ENST00000605323 784 ntBASIC20.65■□□□□ 0.9
TRUB2O95900 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.65■□□□□ 0.9
TRUB2O95900 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
TRUB2O95900 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRUB2O95900 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRUB2O95900 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB2O95900 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRUB2O95900 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.9
TRUB2O95900 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRUB2O95900 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRUB2O95900 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRUB2O95900 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
TRUB2O95900 AC018553.1-201ENST00000616682 1458 ntBASIC20.64■□□□□ 0.89
TRUB2O95900 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 PRORSD1P-201ENST00000295112 541 ntBASIC20.64■□□□□ 0.89
TRUB2O95900 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.64■□□□□ 0.89
TRUB2O95900 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.64■□□□□ 0.89
TRUB2O95900 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.64■□□□□ 0.89
TRUB2O95900 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms