Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
HCN1O60741 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.39■□□□□ 0.53
HCN1O60741 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HCN1O60741 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.39■□□□□ 0.53
HCN1O60741 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
HCN1O60741 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HCN1O60741 TCF3P1-201ENST00000423021 1937 ntBASIC18.39■□□□□ 0.53
HCN1O60741 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.38■□□□□ 0.53
HCN1O60741 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.38■□□□□ 0.53
HCN1O60741 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 AC008403.3-201ENST00000598924 454 ntBASIC18.38■□□□□ 0.53
HCN1O60741 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.38■□□□□ 0.53
HCN1O60741 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.38■□□□□ 0.53
HCN1O60741 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.38■□□□□ 0.53
HCN1O60741 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.38■□□□□ 0.53
HCN1O60741 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HCN1O60741 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.38■□□□□ 0.53
HCN1O60741 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.38■□□□□ 0.53
HCN1O60741 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HCN1O60741 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCN1O60741 BX323043.1-201ENST00000641006 1765 ntBASIC18.37■□□□□ 0.53
HCN1O60741 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.37■□□□□ 0.53
HCN1O60741 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.37■□□□□ 0.53
HCN1O60741 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.37■□□□□ 0.53
HCN1O60741 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
HCN1O60741 AC073648.6-201ENST00000641589 218 ntBASIC18.37■□□□□ 0.53
HCN1O60741 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
HCN1O60741 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.37■□□□□ 0.53
HCN1O60741 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
HCN1O60741 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 SMG8-203ENST00000578922 2178 ntBASIC18.37■□□□□ 0.53
HCN1O60741 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCN1O60741 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.37■□□□□ 0.53
HCN1O60741 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HCN1O60741 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HCN1O60741 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
HCN1O60741 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCN1O60741 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCN1O60741 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.36■□□□□ 0.53
HCN1O60741 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCN1O60741 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HCN1O60741 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HCN1O60741 KRT17P3-201ENST00000420566 1262 ntBASIC18.36■□□□□ 0.53
HCN1O60741 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCN1O60741 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCN1O60741 KRT8P36-201ENST00000489121 1440 ntBASIC18.36■□□□□ 0.53
HCN1O60741 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HCN1O60741 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HCN1O60741 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.36■□□□□ 0.53
HCN1O60741 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.36■□□□□ 0.53
HCN1O60741 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.35■□□□□ 0.53
HCN1O60741 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HCN1O60741 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HCN1O60741 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.35■□□□□ 0.53
HCN1O60741 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCN1O60741 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms