Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNAI2O43623 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNAI2O43623 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SNAI2O43623 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.71□□□□□ -0.05
SNAI2O43623 AC091305.1-201ENST00000479476 895 ntBASIC14.71□□□□□ -0.05
SNAI2O43623 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.71□□□□□ -0.05
SNAI2O43623 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.71□□□□□ -0.05
SNAI2O43623 AC106739.1-201ENST00000617035 715 ntBASIC14.71□□□□□ -0.05
SNAI2O43623 AL355001.2-201ENST00000620617 1191 ntBASIC14.71□□□□□ -0.05
SNAI2O43623 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNAI2O43623 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SNAI2O43623 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.71□□□□□ -0.05
SNAI2O43623 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNAI2O43623 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SNAI2O43623 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SNAI2O43623 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SNAI2O43623 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SNAI2O43623 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
SNAI2O43623 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SNAI2O43623 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SNAI2O43623 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SNAI2O43623 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNAI2O43623 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.7□□□□□ -0.06
SNAI2O43623 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.7□□□□□ -0.06
SNAI2O43623 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.7□□□□□ -0.06
SNAI2O43623 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SNAI2O43623 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.7□□□□□ -0.06
SNAI2O43623 MIR939-201ENST00000401314 82 ntBASIC14.7□□□□□ -0.06
SNAI2O43623 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.7□□□□□ -0.06
SNAI2O43623 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.7□□□□□ -0.06
SNAI2O43623 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNAI2O43623 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.7□□□□□ -0.06
SNAI2O43623 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNAI2O43623 FAM21FP-204ENST00000608637 956 ntBASIC14.7□□□□□ -0.06
SNAI2O43623 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SNAI2O43623 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SNAI2O43623 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNAI2O43623 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNAI2O43623 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNAI2O43623 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNAI2O43623 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNAI2O43623 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.7□□□□□ -0.06
SNAI2O43623 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SNAI2O43623 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNAI2O43623 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SNAI2O43623 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SNAI2O43623 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNAI2O43623 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SNAI2O43623 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.69□□□□□ -0.06
SNAI2O43623 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
SNAI2O43623 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SNAI2O43623 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
SNAI2O43623 AC093484.2-201ENST00000580996 2166 ntBASIC14.69□□□□□ -0.06
SNAI2O43623 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 PBX2P1-201ENST00000493219 1291 ntBASIC14.69□□□□□ -0.06
SNAI2O43623 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.69□□□□□ -0.06
SNAI2O43623 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.69□□□□□ -0.06
SNAI2O43623 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.69□□□□□ -0.06
SNAI2O43623 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.69□□□□□ -0.06
SNAI2O43623 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SNAI2O43623 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNAI2O43623 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.68□□□□□ -0.06
SNAI2O43623 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNAI2O43623 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNAI2O43623 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.68□□□□□ -0.06
SNAI2O43623 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNAI2O43623 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNAI2O43623 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNAI2O43623 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SNAI2O43623 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNAI2O43623 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.68□□□□□ -0.06
SNAI2O43623 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNAI2O43623 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNAI2O43623 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SNAI2O43623 AC007322.3-201ENST00000426526 701 ntBASIC14.68□□□□□ -0.06
SNAI2O43623 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.68□□□□□ -0.06
SNAI2O43623 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.68□□□□□ -0.06
SNAI2O43623 DUX4L2-201ENST00000561772 1275 ntBASIC14.68□□□□□ -0.06
SNAI2O43623 AF213884.3-201ENST00000563833 479 ntBASIC14.68□□□□□ -0.06
SNAI2O43623 AC243732.1-201ENST00000612648 864 ntBASIC14.68□□□□□ -0.06
SNAI2O43623 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
SNAI2O43623 DUX4L6-201ENST00000626483 1275 ntBASIC14.68□□□□□ -0.06
SNAI2O43623 DUX4L1-201ENST00000627662 1275 ntBASIC14.68□□□□□ -0.06
SNAI2O43623 DUX4L8-201ENST00000629013 1275 ntBASIC14.68□□□□□ -0.06
SNAI2O43623 DUX4L3-201ENST00000630187 1275 ntBASIC14.68□□□□□ -0.06
SNAI2O43623 DUX4L7-201ENST00000630678 1275 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms