Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.76■□□□□ 0.59
NTN3O00634 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.76■□□□□ 0.59
NTN3O00634 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NTN3O00634 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.76■□□□□ 0.59
NTN3O00634 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.76■□□□□ 0.59
NTN3O00634 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.76■□□□□ 0.59
NTN3O00634 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.76■□□□□ 0.59
NTN3O00634 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NTN3O00634 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NTN3O00634 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.76■□□□□ 0.59
NTN3O00634 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NTN3O00634 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NTN3O00634 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NTN3O00634 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NTN3O00634 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NTN3O00634 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NTN3O00634 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NTN3O00634 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NTN3O00634 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NTN3O00634 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NTN3O00634 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.75■□□□□ 0.59
NTN3O00634 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NTN3O00634 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NTN3O00634 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
NTN3O00634 HMGA1P5-201ENST00000412453 271 ntBASIC18.75■□□□□ 0.59
NTN3O00634 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NTN3O00634 MFAP1P1-201ENST00000442257 1255 ntBASIC18.75■□□□□ 0.59
NTN3O00634 FAM207BP-201ENST00000447172 505 ntBASIC18.75■□□□□ 0.59
NTN3O00634 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NTN3O00634 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.75■□□□□ 0.59
NTN3O00634 SMG8-203ENST00000578922 2178 ntBASIC18.75■□□□□ 0.59
NTN3O00634 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NTN3O00634 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.74■□□□□ 0.59
NTN3O00634 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NTN3O00634 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.74■□□□□ 0.59
NTN3O00634 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NTN3O00634 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NTN3O00634 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NTN3O00634 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NTN3O00634 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.74■□□□□ 0.59
NTN3O00634 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.74■□□□□ 0.59
NTN3O00634 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.74■□□□□ 0.59
NTN3O00634 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.74■□□□□ 0.59
NTN3O00634 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NTN3O00634 AC087388.1-201ENST00000571370 1112 ntBASIC18.74■□□□□ 0.59
NTN3O00634 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.74■□□□□ 0.59
NTN3O00634 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.74■□□□□ 0.59
NTN3O00634 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.74■□□□□ 0.59
NTN3O00634 AC116562.4-202ENST00000641738 218 ntBASIC18.74■□□□□ 0.59
NTN3O00634 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NTN3O00634 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.73■□□□□ 0.59
NTN3O00634 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.73■□□□□ 0.59
NTN3O00634 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 AC091390.4-202ENST00000476426 537 ntBASIC18.73■□□□□ 0.59
NTN3O00634 Z85996.1-201ENST00000494644 937 ntBASIC18.73■□□□□ 0.59
NTN3O00634 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.73■□□□□ 0.59
NTN3O00634 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NTN3O00634 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.73■□□□□ 0.59
NTN3O00634 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.73■□□□□ 0.59
NTN3O00634 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NTN3O00634 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 KRT8P8-201ENST00000434750 1448 ntBASIC18.73■□□□□ 0.59
NTN3O00634 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NTN3O00634 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NTN3O00634 BX119927.1-201ENST00000636596 1552 ntBASIC18.72■□□□□ 0.59
NTN3O00634 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NTN3O00634 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NTN3O00634 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NTN3O00634 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.72■□□□□ 0.59
NTN3O00634 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
NTN3O00634 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NTN3O00634 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.72■□□□□ 0.59
NTN3O00634 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
NTN3O00634 AK4P3-201ENST00000418260 669 ntBASIC18.72■□□□□ 0.59
NTN3O00634 SLC25A1P2-201ENST00000430693 912 ntBASIC18.72■□□□□ 0.59
NTN3O00634 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms