Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC090164.3-201ENST00000610780 2143 ntBASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 CDV3P1-201ENST00000471403 739 ntBASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 AC104187.1-201ENST00000607510 612 ntBASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV3S1A0A5B6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 AL031598.1-201ENST00000561511 1773 ntBASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 AL031963.3-201ENST00000606441 850 ntBASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.46■□□□□ 0.55
TCRBV3S1A0A5B6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
TCRBV3S1A0A5B6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
TCRBV3S1A0A5B6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 SLC7A5P1-201ENST00000568957 537 ntBASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV3S1A0A5B6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 WIZP1-201ENST00000531444 2299 ntBASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 AC141586.3-201ENST00000562166 1838 ntBASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV3S1A0A5B6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms