Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-3A0A0B4J271 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 HLA-G-202ENST00000376815 851 ntBASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 HLA-G-203ENST00000376818 1127 ntBASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 AC093787.1-201ENST00000450396 207 ntBASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 AC116562.4-201ENST00000641316 2276 ntBASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-3A0A0B4J271 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
TRAV12-3A0A0B4J271 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
TRAV12-3A0A0B4J271 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 AC080038.1-201ENST00000611274 1154 ntBASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-3A0A0B4J271 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms