Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 AC112503.2-201ENST00000609005 552 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC01613-201ENST00000561476 2780 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.21□□□□□ -1.25
COL4A3BPQ9Y5P4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
COL4A3BPQ9Y5P4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL4A3BPQ9Y5P4 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.21□□□□□ -1.25
COL4A3BPQ9Y5P4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 STAG3L4-201ENST00000352103 530 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 RNA5SP77-201ENST00000365394 120 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 MARK2P8-201ENST00000476069 952 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 HMGN1P16-201ENST00000508308 283 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC084337.1-201ENST00000524809 686 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AL133399.1-201ENST00000527476 298 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC024405.1-201ENST00000532521 1042 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC097504.2-201ENST00000608088 454 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC005156.1-201ENST00000613371 573 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AL445528.2-201ENST00000620582 470 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 MRPL57P1-201ENST00000621486 265 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC022919.1-201ENST00000624979 626 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC010325.3-201ENST00000641084 394 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 AC006213.6-201ENST00000623722 4179 ntBASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.21□□□□□ -1.26
COL4A3BPQ9Y5P4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 MSL3P1-202ENST00000440028 1468 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 PSMA6P1-201ENST00000400275 741 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 RNU2-17P-201ENST00000410290 190 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 RPL24P2-201ENST00000421023 475 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AL139158.1-201ENST00000424719 340 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AL512661.1-201ENST00000434586 1253 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 TIMM8BP2-201ENST00000445940 251 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 COX4I1P2-201ENST00000447446 547 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 RPS27P20-201ENST00000492051 246 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AC022206.1-201ENST00000495947 347 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 HAUS1P1-201ENST00000505275 832 ntBASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.2□□□□□ -1.26
COL4A3BPQ9Y5P4 AC119751.4-201ENST00000507498 357 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms