Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 PWRN1-212ENST00000569908 1435 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 AL133243.2-201ENST00000610331 1621 ntBASIC7.6□□□□□ -1.19
PCDHGA11Q9Y5H2 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 HSPD1P1-201ENST00000503199 1726 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 MIR16-1-201ENST00000385271 89 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 TMSB4XP8-201ENST00000402089 135 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SKP119-201ENST00000410753 273 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 TMSB4XP6-201ENST00000415187 135 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 PPIAP25-201ENST00000420177 540 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 GAPDHP49-201ENST00000421421 961 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 TMSB4XP1-201ENST00000424567 135 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC007742.1-201ENST00000425789 329 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AL512649.1-201ENST00000428997 581 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 ELOCP26-201ENST00000436067 329 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC244505.5-201ENST00000443639 207 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SL740P-201ENST00000467060 344 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AP000797.1-201ENST00000478870 387 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC104687.1-201ENST00000485829 412 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SL702P-201ENST00000488394 292 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 RPL7AP26-201ENST00000488538 813 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 RPL7AP2-201ENST00000496515 740 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 RNU6-416P-201ENST00000516265 103 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SKP31-201ENST00000516354 278 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 OR5AL2P-201ENST00000532185 920 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC005230.1-201ENST00000555418 285 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC121758.1-202ENST00000556917 658 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 SOD1P2-201ENST00000563903 451 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 pRNA.12-201ENST00000614353 90 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 pRNA.3-201ENST00000615048 90 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 FLII-230ENST00000628188 156 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AC073488.5-201ENST00000631993 754 ntBASIC7.59□□□□□ -1.19
PCDHGA11Q9Y5H2 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms