Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
SHANK2Q9UPX8 AL121768.1-201ENST00000613917 2544 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 AL161756.3-201ENST00000641216 2071 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 GABARAPL3-201ENST00000412799 354 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 AC096775.1-201ENST00000437724 448 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 AC006335.2-201ENST00000437993 330 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 GSTA7P-201ENST00000438425 448 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 OR7E116P-201ENST00000448529 957 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 RPL35AP19-201ENST00000469425 329 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 AC099521.1-201ENST00000482557 334 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 AC109481.1-201ENST00000509173 282 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 OR51K1P-201ENST00000510214 950 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 AC063977.5-201ENST00000601044 974 ntBASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SHANK2Q9UPX8 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 VDAC2P4-201ENST00000452925 711 ntBASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 AC100832.1-201ENST00000471945 383 ntBASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 RN7SL547P-201ENST00000490793 290 ntBASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 AL512329.2-201ENST00000607350 548 ntBASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 CASC19-264ENST00000641912 1184 ntBASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 AC026951.1-201ENST00000559530 2459 ntBASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 AC005224.3-201ENST00000584683 2140 ntBASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 AFP-201ENST00000226359 1914 ntTSL 5 BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 AC022034.1-201ENST00000512867 2156 ntBASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SHANK2Q9UPX8 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SHANK2Q9UPX8 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SHANK2Q9UPX8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SHANK2Q9UPX8 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
SHANK2Q9UPX8 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.65□□□□□ -1.03
SHANK2Q9UPX8 AC005034.3-201ENST00000604845 1747 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AK3P5-201ENST00000432033 519 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC023141.8-201ENST00000442554 208 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AL355032.1-201ENST00000472981 438 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC074255.1-201ENST00000511259 501 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC253576.1-201ENST00000511645 1156 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AP001885.1-201ENST00000621658 558 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC114786.1-201ENST00000512892 1415 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 U3.2-201ENST00000362981 210 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 EIF4A1P7-201ENST00000421800 1220 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 RANP1-206ENST00000455094 651 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 OR2AO1P-201ENST00000476497 403 ntBASIC8.64□□□□□ -1.03
SHANK2Q9UPX8 EIF1P7-201ENST00000487533 337 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms