Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 AL035660.1-201ENST00000422041 222 ntBASIC5.66□□□□□ -1.5
CCDC88CQ9P219 KIF4CP-201ENST00000422742 1279 ntBASIC5.66□□□□□ -1.5
CCDC88CQ9P219 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 AP001357.1-201ENST00000586304 1053 ntBASIC5.66□□□□□ -1.5
CCDC88CQ9P219 AC141002.1-201ENST00000607025 279 ntBASIC5.66□□□□□ -1.5
CCDC88CQ9P219 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 AC005522.1-201ENST00000395416 346 ntBASIC5.65□□□□□ -1.5
CCDC88CQ9P219 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 RN7SKP229-201ENST00000410465 302 ntBASIC5.65□□□□□ -1.5
CCDC88CQ9P219 PTCD2P2-201ENST00000415579 1095 ntBASIC5.65□□□□□ -1.5
CCDC88CQ9P219 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 AC011476.1-201ENST00000466725 307 ntBASIC5.65□□□□□ -1.5
CCDC88CQ9P219 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 AC011411.1-201ENST00000509592 876 ntBASIC5.65□□□□□ -1.5
CCDC88CQ9P219 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 AC090424.1-201ENST00000535243 736 ntBASIC5.65□□□□□ -1.5
CCDC88CQ9P219 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 AC100767.2-201ENST00000604840 693 ntBASIC5.65□□□□□ -1.5
CCDC88CQ9P219 MIR6886-201ENST00000619864 61 ntBASIC5.65□□□□□ -1.5
CCDC88CQ9P219 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 AL161901.1-201ENST00000624954 3425 ntBASIC5.65□□□□□ -1.5
CCDC88CQ9P219 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC88CQ9P219 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 RN7SKP292-201ENST00000365522 317 ntBASIC5.65□□□□□ -1.51
CCDC88CQ9P219 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 AL161636.2-201ENST00000445179 927 ntBASIC5.65□□□□□ -1.51
CCDC88CQ9P219 AL445466.1-201ENST00000448432 357 ntBASIC5.65□□□□□ -1.51
CCDC88CQ9P219 AC023141.9-201ENST00000458734 412 ntBASIC5.65□□□□□ -1.51
CCDC88CQ9P219 RN7SL174P-201ENST00000475578 289 ntBASIC5.65□□□□□ -1.51
CCDC88CQ9P219 ST13P12-201ENST00000508958 1094 ntBASIC5.65□□□□□ -1.51
CCDC88CQ9P219 OR5H7P-201ENST00000514084 930 ntBASIC5.65□□□□□ -1.51
CCDC88CQ9P219 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 AC135626.1-201ENST00000556983 435 ntBASIC5.65□□□□□ -1.51
CCDC88CQ9P219 FAM27E4-201ENST00000605259 342 ntBASIC5.65□□□□□ -1.51
CCDC88CQ9P219 AC024589.2-201ENST00000605642 1294 ntBASIC5.65□□□□□ -1.51
CCDC88CQ9P219 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC88CQ9P219 AC011416.1-201ENST00000514947 1732 ntBASIC5.65□□□□□ -1.51
CCDC88CQ9P219 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC087516.1-201ENST00000561236 2428 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 TTC41P-205ENST00000551270 3963 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC104843.2-201ENST00000427666 297 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 BX323845.3-201ENST00000428215 527 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC115223.1-201ENST00000466377 870 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 RN7SL177P-201ENST00000476596 299 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC010343.2-201ENST00000510162 224 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 RN7SKP67-201ENST00000515905 235 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 RNA5SP271-201ENST00000516700 88 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 DPPA2P4-201ENST00000563717 878 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 AC007448.1-201ENST00000582714 234 ntBASIC5.64□□□□□ -1.51
CCDC88CQ9P219 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC88CQ9P219 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms