Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 TXNP4-201ENST00000575018 310 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 MIR4701-201ENST00000583094 63 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AL512413.1-201ENST00000606489 382 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 RNA5SP439-201ENST00000617595 124 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AL078595.2-201ENST00000605309 1780 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 NLRP3P1-201ENST00000622303 1785 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AC125336.1-201ENST00000508893 2827 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 NR1H5P-201ENST00000452683 1377 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 MFSD8-219ENST00000641228 2559 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AC005261.2-201ENST00000593427 4258 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 MTCO1P28-201ENST00000574177 1528 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AC009962.1-201ENST00000567327 3813 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 PSMA6P1-201ENST00000400275 741 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AL133260.1-201ENST00000405720 405 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 RPL5P2-201ENST00000429598 854 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AC138761.5-201ENST00000433967 325 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 OR7E157P-201ENST00000494376 911 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 OR7E99P-201ENST00000505750 922 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 NPM1P21-201ENST00000513394 762 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AC111000.6-201ENST00000514471 709 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 GARSP1-201ENST00000570895 719 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 HIRAP1-201ENST00000605318 787 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AL109924.4-201ENST00000623089 670 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AC005618.4-201ENST00000625053 554 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 AP004607.3-201ENST00000530354 3915 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 GNL2P1-201ENST00000451274 2190 ntBASIC5.53□□□□□ -1.52
VAPAQ9P0L0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VAPAQ9P0L0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 AC004656.1-201ENST00000568479 4951 ntBASIC5.52□□□□□ -1.53
VAPAQ9P0L0 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 RN7SKP77-201ENST00000363261 353 ntBASIC5.52□□□□□ -1.53
VAPAQ9P0L0 MIR188-201ENST00000385034 86 ntBASIC5.52□□□□□ -1.53
VAPAQ9P0L0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 RPL35AP3-201ENST00000414680 288 ntBASIC5.52□□□□□ -1.53
VAPAQ9P0L0 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 AC017078.1-201ENST00000416146 368 ntBASIC5.52□□□□□ -1.53
VAPAQ9P0L0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.52□□□□□ -1.53
VAPAQ9P0L0 RPSAP65-201ENST00000429660 595 ntBASIC5.52□□□□□ -1.53
VAPAQ9P0L0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 SUMO2P8-201ENST00000434672 286 ntBASIC5.52□□□□□ -1.53
VAPAQ9P0L0 AC023141.3-201ENST00000436698 278 ntBASIC5.52□□□□□ -1.53
VAPAQ9P0L0 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.52□□□□□ -1.53
VAPAQ9P0L0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms