Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 RNU6-1090P-201ENST00000364065 94 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 RN7SKP48-201ENST00000365031 328 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 OLA1P1-201ENST00000396387 1189 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 RPL12P27-201ENST00000414870 496 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC005189.1-201ENST00000431286 310 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 ARMC4P1-201ENST00000438905 707 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AL450263.2-201ENST00000439400 589 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 RPS4XP4-201ENST00000443195 763 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 OR51B8P-201ENST00000449892 769 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AL354714.5-201ENST00000450131 590 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 ST13P18-201ENST00000456632 1027 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AL162395.1-201ENST00000457882 422 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 IFNA22P-201ENST00000458710 570 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 RN7SL170P-201ENST00000487098 295 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC116917.1-201ENST00000520558 305 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 PDCL3P1-201ENST00000534575 734 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC139085.1-201ENST00000582716 182 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AL109918.3-201ENST00000603072 338 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC136443.5-201ENST00000603741 370 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC087283.1-201ENST00000604029 1074 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC098614.4-201ENST00000607601 462 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AL132765.2-201ENST00000610812 351 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AL139254.2-202ENST00000641937 1156 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC138409.1-201ENST00000505001 3598 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC079097.1-201ENST00000512187 1399 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AC119674.1-202ENST00000641333 1860 ntBASIC7.58□□□□□ -1.2
CNTNAP3Q9BZ76 AP002765.1-201ENST00000528675 1507 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 DET1-202ENST00000444300 2154 ntTSL 5 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 TADA2A-202ENST00000612272 1948 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 Y_RNA.58-201ENST00000362807 102 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 Y_RNA.154-201ENST00000363624 102 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 RNY3P1-201ENST00000365085 102 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 RNY3-201ENST00000365484 102 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 Y_RNA.490-201ENST00000384413 102 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 SNORD86-201ENST00000391196 86 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 DNAJC19P6-201ENST00000401853 280 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 AL033519.1-201ENST00000407266 307 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 RN7SKP279-201ENST00000411383 298 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 BTF3P9-201ENST00000418784 283 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 AL050321.1-201ENST00000432363 400 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 MTND2P29-201ENST00000438595 412 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 RPL21P134-201ENST00000453468 483 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 RPL35AP19-201ENST00000469425 329 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 RPL7P18-201ENST00000478965 734 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 AC019235.1-201ENST00000503847 207 ntBASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC7.57□□□□□ -1.2
CNTNAP3Q9BZ76 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms