Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AL772363.1-201ENST00000371390 3222 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 NAP1L3-201ENST00000373079 2639 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 PWP1-201ENST00000412830 2621 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ECM2-204ENST00000444490 2648 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 DCLRE1C-201ENST00000357717 2228 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 AC100810.3-201ENST00000633189 2240 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 OPRM1-208ENST00000434900 2033 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 WTAP-202ENST00000358372 3656 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ATP13A1-201ENST00000291503 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 KAT7-202ENST00000424009 3469 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 NAA50-210ENST00000616174 3257 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 FP700125.1-201ENST00000628622 3262 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 PHC1P1-201ENST00000554937 3061 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 CLDN10-203ENST00000376873 2656 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 S100PBP-202ENST00000373475 4322 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 PLA2G4C-219ENST00000599111 2458 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 DDX11-201ENST00000228264 3717 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 CSPG4P5-201ENST00000558731 3730 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 PKNOX1-203ENST00000432907 5180 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 NMUR2-201ENST00000255262 2073 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 GOLGA8A-202ENST00000432566 4577 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ZDHHC6-205ENST00000626395 2906 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 RBM19-202ENST00000392561 3574 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 PNPT1P1-201ENST00000450418 2315 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 WFDC2-201ENST00000217425 356 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 CD300LG-201ENST00000293396 988 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 NDUFA7-201ENST00000301457 601 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 KRTAP4-8-201ENST00000318329 468 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 AL451165.1-201ENST00000334441 328 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 CD79B-202ENST00000349817 378 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 SNRNP35-201ENST00000350887 942 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 MIRLET7I-201ENST00000362309 84 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 U8.1-201ENST00000362843 134 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU6-777P-201ENST00000364265 104 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 SNORD115-35-201ENST00000365122 82 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ST3GAL3-214ENST00000372366 670 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 MOG-217ENST00000376891 889 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU6-936P-201ENST00000384005 107 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU6-424P-201ENST00000384367 105 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU6-411P-201ENST00000384451 107 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 Y_RNA.533-201ENST00000384596 114 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 Y_RNA.570-201ENST00000384750 101 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 MOG-222ENST00000396701 910 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 MOG-223ENST00000396704 675 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 HBA2-202ENST00000397806 513 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 MYL5-201ENST00000400159 666 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 KRTAP10-6-201ENST00000400368 1238 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 RPL23AP17-201ENST00000401064 499 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 MIR874-201ENST00000401190 78 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 AL356277.1-201ENST00000401875 267 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 AL353747.1-201ENST00000404577 267 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 RPL23P8-201ENST00000405810 428 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 GAGE10-201ENST00000407599 538 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 U3.42-201ENST00000408746 214 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU4-46P-201ENST00000410818 138 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU5A-5P-201ENST00000411054 116 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 EIF4A1P3-201ENST00000411521 244 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 CTSLP8-201ENST00000413075 967 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 PGAM1P7-201ENST00000413837 737 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 TMSB10P2-201ENST00000416049 131 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 ZNF268-202ENST00000416488 897 ntTSL 4 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 OR13E1P-201ENST00000417104 922 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 CNN2P9-201ENST00000417134 909 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 SULF1-203ENST00000419716 4697 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 RBMY2FP-202ENST00000420346 1263 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 AL049795.1-202ENST00000421616 786 ntTSL 3 BASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 EEF1GP7-201ENST00000422983 703 ntBASIC2.1□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC01320-201ENST00000423663 1109 ntTSL 2 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms