Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 EFCAB5-208ENST00000536908 2826 ntTSL 2 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MRE11P1-201ENST00000464884 2127 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 TRHR-201ENST00000311762 1415 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AC005261.2-201ENST00000593427 4258 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SMUG1-201ENST00000243112 627 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SCGB2A1-201ENST00000244930 521 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AURKC-201ENST00000302804 1247 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 OR56B3P-201ENST00000316517 947 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SERF2-202ENST00000339624 506 ntTSL 2 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.72-201ENST00000362894 103 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 RNU6-251P-201ENST00000363235 104 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.160-201ENST00000363677 92 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.166-201ENST00000363730 102 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 RNU6-115P-201ENST00000364310 107 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SALL4-202ENST00000371539 1151 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AC009967.1-201ENST00000379462 793 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SPINK4-202ENST00000379725 533 ntTSL 3 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 RNU6-877P-201ENST00000383868 107 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 TRBV3-1-201ENST00000390387 391 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SPACA3-203ENST00000394638 508 ntTSL 3 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 RPL5P31-201ENST00000399168 635 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AL589647.1-201ENST00000402485 466 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AL356057.2-201ENST00000403318 432 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MORF4L1P1-201ENST00000404582 967 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AL390316.1-201ENST00000406279 553 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MIR1302-11-201ENST00000408051 138 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MIR1302-9-201ENST00000408365 138 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MIR1303-201ENST00000408625 86 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MIR1302-10-201ENST00000408734 138 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.608-201ENST00000410647 95 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 RN7SKP222-201ENST00000410651 315 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 RN7SKP270-201ENST00000411297 312 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 RNU2-6P-201ENST00000411404 190 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MESTP4-201ENST00000412333 1204 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 RPL4P5-201ENST00000413888 1276 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 CABYR-205ENST00000415309 824 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AC022400.5-201ENST00000415917 1031 ntTSL 3 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 ZNF70P1-201ENST00000417480 624 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 HMGB3P20-201ENST00000417997 600 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 RBMY2KP-201ENST00000418221 992 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 USP9YP27-201ENST00000418455 438 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 RPL36P1-201ENST00000419720 225 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SEMA3B-AS1-201ENST00000421735 338 ntTSL 2 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AC233981.1-201ENST00000423224 461 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 MTCO1P20-201ENST00000425366 358 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 GAPDHP69-201ENST00000425504 1008 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AL513185.2-201ENST00000425543 193 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 PRUNEP1-201ENST00000425846 705 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms