Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC020916.2-201ENST00000591242 360 ntBASIC4.67□□□□□ -1.66
VGLL1Q99990 MIR132-201ENST00000591554 101 ntBASIC4.67□□□□□ -1.66
VGLL1Q99990 AP003117.1-201ENST00000602771 554 ntBASIC4.67□□□□□ -1.66
VGLL1Q99990 AC098483.2-201ENST00000603158 454 ntBASIC4.67□□□□□ -1.66
VGLL1Q99990 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.67□□□□□ -1.66
VGLL1Q99990 AC087468.1-201ENST00000604365 630 ntBASIC4.67□□□□□ -1.66
VGLL1Q99990 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.67□□□□□ -1.66
VGLL1Q99990 AC004890.3-201ENST00000605566 1095 ntBASIC4.67□□□□□ -1.66
VGLL1Q99990 AL139022.2-201ENST00000606934 443 ntBASIC4.67□□□□□ -1.66
VGLL1Q99990 SNORA35B-201ENST00000607417 129 ntBASIC4.67□□□□□ -1.66
VGLL1Q99990 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.67□□□□□ -1.66
VGLL1Q99990 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VGLL1Q99990 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VGLL1Q99990 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VGLL1Q99990 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.67□□□□□ -1.66
VGLL1Q99990 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.67□□□□□ -1.66
VGLL1Q99990 AL355488.2-201ENST00000609909 2850 ntBASIC4.67□□□□□ -1.66
VGLL1Q99990 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VGLL1Q99990 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VGLL1Q99990 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VGLL1Q99990 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VGLL1Q99990 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC4.67□□□□□ -1.66
VGLL1Q99990 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
VGLL1Q99990 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VGLL1Q99990 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 AL136984.1-201ENST00000607611 1893 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 AL512283.1-201ENST00000606756 1384 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC010266.2-201ENST00000564741 3255 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.66□□□□□ -1.66
VGLL1Q99990 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC010894.1-201ENST00000313760 361 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 RNU1-5P-201ENST00000362684 144 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 AC026310.1-201ENST00000396004 378 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 AC121334.1-201ENST00000396414 802 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 AL096800.1-201ENST00000405326 893 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 RN7SKP205-201ENST00000410999 307 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.66□□□□□ -1.66
VGLL1Q99990 GTF3AP1-201ENST00000416942 1004 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.66□□□□□ -1.66
VGLL1Q99990 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC092651.1-201ENST00000426110 312 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AL731534.1-201ENST00000434711 269 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 AL390879.1-201ENST00000439143 386 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.66□□□□□ -1.66
VGLL1Q99990 DEFB109A-201ENST00000482450 265 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 RN7SL267P-201ENST00000485107 261 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 RN7SL655P-201ENST00000486087 298 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 RN7SL350P-201ENST00000492591 299 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC008628.1-201ENST00000508663 265 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 AC093664.1-201ENST00000511779 289 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC130364.2-201ENST00000528639 604 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.66□□□□□ -1.66
VGLL1Q99990 OR4C49P-201ENST00000563891 900 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 AL158211.1-201ENST00000566763 763 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 MIR4433B-201ENST00000581329 102 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.66□□□□□ -1.66
VGLL1Q99990 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 AC117490.2-201ENST00000610042 594 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.66□□□□□ -1.66
VGLL1Q99990 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.66□□□□□ -1.66
VGLL1Q99990 AC022306.3-201ENST00000619930 550 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 AC091059.2-201ENST00000623355 614 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.66□□□□□ -1.66
VGLL1Q99990 OR7A1P-202ENST00000641542 1158 ntBASIC4.66□□□□□ -1.66
VGLL1Q99990 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.66□□□□□ -1.66
VGLL1Q99990 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
VGLL1Q99990 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.66□□□□□ -1.66
VGLL1Q99990 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.66□□□□□ -1.66
VGLL1Q99990 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
VGLL1Q99990 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
VGLL1Q99990 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms