Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CCDC7Q96M83 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CCDC7Q96M83 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CCDC7Q96M83 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CCDC7Q96M83 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CCDC7Q96M83 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 SNRPEP6-201ENST00000407465 277 ntBASIC8.25□□□□□ -1.09
CCDC7Q96M83 SSR1P1-201ENST00000407630 814 ntBASIC8.25□□□□□ -1.09
CCDC7Q96M83 RPL23AP18-201ENST00000416139 468 ntBASIC8.25□□□□□ -1.09
CCDC7Q96M83 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 RPS4XP5-201ENST00000419038 768 ntBASIC8.25□□□□□ -1.09
CCDC7Q96M83 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 AC064862.4-201ENST00000442180 334 ntBASIC8.25□□□□□ -1.09
CCDC7Q96M83 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CCDC7Q96M83 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CCDC7Q96M83 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 ATP5LP3-201ENST00000514223 304 ntBASIC8.25□□□□□ -1.09
CCDC7Q96M83 SETP21-201ENST00000514799 892 ntBASIC8.25□□□□□ -1.09
CCDC7Q96M83 RNA5SP362-201ENST00000516048 118 ntBASIC8.25□□□□□ -1.09
CCDC7Q96M83 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 AC090424.1-201ENST00000535243 736 ntBASIC8.25□□□□□ -1.09
CCDC7Q96M83 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CCDC7Q96M83 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CCDC7Q96M83 AL117339.4-201ENST00000608335 7063 ntBASIC8.25□□□□□ -1.09
CCDC7Q96M83 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CCDC7Q96M83 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 AMELX-201ENST00000348912 737 ntTSL 5 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 RN7SKP278-201ENST00000410504 342 ntBASIC8.24□□□□□ -1.09
CCDC7Q96M83 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 AL512637.1-201ENST00000439523 1231 ntBASIC8.24□□□□□ -1.09
CCDC7Q96M83 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 AC083795.1-201ENST00000491760 320 ntBASIC8.24□□□□□ -1.09
CCDC7Q96M83 AC002456.2-201ENST00000509356 380 ntBASIC8.24□□□□□ -1.09
CCDC7Q96M83 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 AC005244.1-201ENST00000582566 339 ntBASIC8.24□□□□□ -1.09
CCDC7Q96M83 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC7Q96M83 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 MAPK10-350ENST00000641777 965 ntBASIC8.24□□□□□ -1.09
CCDC7Q96M83 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC7Q96M83 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC7Q96M83 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC7Q96M83 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC7Q96M83 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
CCDC7Q96M83 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CCDC7Q96M83 AL391361.1-201ENST00000405580 489 ntBASIC8.23□□□□□ -1.09
CCDC7Q96M83 RPS3AP2-201ENST00000407190 754 ntBASIC8.23□□□□□ -1.09
CCDC7Q96M83 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC8.23□□□□□ -1.09
CCDC7Q96M83 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC8.23□□□□□ -1.09
CCDC7Q96M83 AL603882.1-201ENST00000463059 681 ntBASIC8.23□□□□□ -1.09
CCDC7Q96M83 RPSAP37-201ENST00000470913 821 ntBASIC8.23□□□□□ -1.09
CCDC7Q96M83 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC7Q96M83 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC7Q96M83 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC8.23□□□□□ -1.09
CCDC7Q96M83 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.23□□□□□ -1.09
CCDC7Q96M83 AC010547.6-201ENST00000571789 193 ntBASIC8.23□□□□□ -1.09
CCDC7Q96M83 MIR4489-201ENST00000578869 62 ntBASIC8.23□□□□□ -1.09
CCDC7Q96M83 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.23□□□□□ -1.09
CCDC7Q96M83 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC8.23□□□□□ -1.09
CCDC7Q96M83 RN7SL787P-201ENST00000613000 284 ntBASIC8.23□□□□□ -1.09
CCDC7Q96M83 OR11H2-202ENST00000641517 1085 ntBASIC8.23□□□□□ -1.09
CCDC7Q96M83 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC7Q96M83 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC7Q96M83 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC7Q96M83 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.23□□□□□ -1.09
CCDC7Q96M83 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC7Q96M83 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CCDC7Q96M83 DCN-218ENST00000551354 2924 ntTSL 3 BASIC8.23□□□□□ -1.09
CCDC7Q96M83 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
CCDC7Q96M83 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC7Q96M83 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC7Q96M83 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CCDC7Q96M83 FBXL21-201ENST00000297158 1305 ntBASIC8.23□□□□□ -1.09
CCDC7Q96M83 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CCDC7Q96M83 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 RPL34P27-201ENST00000428810 349 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC093166.4-201ENST00000457867 318 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC026348.1-201ENST00000462549 1053 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 RN7SKP67-201ENST00000515905 235 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 IGKV2-19-201ENST00000518132 283 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC112191.2-201ENST00000522428 333 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC126615.2-201ENST00000553003 515 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms