Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 ZNF37BP-203ENST00000452306 1352 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 RPE-216ENST00000454822 2130 ntTSL 2 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 RPS20P20-201ENST00000460498 340 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC084878.1-201ENST00000480555 648 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AF213884.1-201ENST00000488102 463 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 RPL21P42-201ENST00000488408 464 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 SNORA19.2-201ENST00000516013 114 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AP002765.1-201ENST00000528675 1507 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC243972.3-201ENST00000539655 198 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC004817.2-201ENST00000561794 651 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC137800.2-201ENST00000574375 120 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 RN7SL32P-201ENST00000580514 281 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 BNIP3P23-201ENST00000599655 511 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 MARK3P1-201ENST00000604796 643 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC010200.2-201ENST00000605098 235 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC106782.6-201ENST00000611264 512 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AL355974.3-201ENST00000617383 467 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AP000648.2-201ENST00000624182 404 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 AC127459.1-201ENST00000563129 2768 ntBASIC8.67□□□□□ -1.02
LRCH3Q96II8 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC8.67□□□□□ -1.02
LRCH3Q96II8 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LRCH3Q96II8 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 POLR2D-203ENST00000409955 1758 ntTSL 2 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 RNU6-1309P-201ENST00000363305 108 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 RNU6-1085P-201ENST00000363576 107 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 RNU6-474P-201ENST00000384243 107 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 RPL7P44-201ENST00000424827 742 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 NANOGP4-201ENST00000427230 913 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AL365400.1-201ENST00000431854 640 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC006480.1-201ENST00000449887 378 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 snoU109.1-201ENST00000459339 135 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 SNORA18.6-201ENST00000516792 115 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC044836.1-201ENST00000519514 274 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC126323.4-201ENST00000566935 234 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 MIR3149-201ENST00000584629 83 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC107214.2-201ENST00000608204 634 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC005021.1-201ENST00000608730 355 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.66□□□□□ -1.02
LRCH3Q96II8 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms